| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_26203-4.6 | HISTONE DEACETYLASE HDAC1-RELATED | Bpl_scaf_26203 | 448018 | 469423 | - |
| CDS | |||||
| Bpl_scaf_26203-4.6 | |||||
| Transcript |
| Bpl_scaf_26203-4.6 |
| Protein |
| Bpl_scaf_26203-4.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00850 | Hist_deacetyl | Histone deacetylase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000286 | Family | Histone deacetylase family | Interproscan |
| IPR003084 | Family | Histone deacetylase | Interproscan |
| IPR023696 | Homologous_superfamily | Ureohydrolase domain superfamily | Interproscan |
| IPR023801 | Domain | Histone deacetylase domain | Interproscan |
| IPR037138 | Homologous_superfamily | Histone deacetylase domain superfamily | Interproscan |
| IPR050284 | Family | Histone deacetylase and polyamine deacetylase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10625 | HISTONE DEACETYLASE HDAC1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000122 | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0004407 | Molecular Function | histone deacetylase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0016575 | Biological Process | obsolete histone deacetylation | Interproscan |
| GO:0016581 | Cellular Component | NuRD complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06067 | HDAC1_2; histone deacetylase 1/2 | EC:3.5.1.98 | Notch signaling pathway | ko04330 | PMID: 28812709 |
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Thyroid hormone signaling pathway | ko04919 | PMID: 28812709 | |||
| Longevity regulating pathway - multiple species | ko04213 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Transcriptional misregulation in cancers | ko05202 | PMID: 28812709 | |||
| Viral carcinogenesis | ko05203 | PMID: 28812709 | |||
| Chronic myeloid leukemia | ko05220 | PMID: 28812709 | |||
| Huntington's disease | ko05016 | PMID: 28812709 | |||
| Alcoholism | ko05034 | PMID: 28812709 | |||
| Epstein-Barr virus infection | ko05169 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_26203-4.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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