| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_25972-2.11 | - | Bpl_scaf_25972 | 253793 | 268082 | + |
| CDS | |||||
| Bpl_scaf_25972-2.11 | |||||
| Transcript |
| Bpl_scaf_25972-2.11 |
| Protein |
| Bpl_scaf_25972-2.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00725 | 3HCDH | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain | Domain | Interproscan |
| PF02737 | 3HCDH_N | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006108 | Domain | 3-hydroxyacyl-CoA dehydrogenase, C-terminal | Interproscan |
| IPR006176 | Domain | 3-hydroxyacyl-CoA dehydrogenase, NAD binding | Interproscan |
| IPR006180 | Conserved_site | 3-hydroxyacyl-CoA dehydrogenase, conserved site | Interproscan |
| IPR008927 | Homologous_superfamily | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Interproscan |
| IPR013328 | Homologous_superfamily | 6-phosphogluconate dehydrogenase, domain 2 | Interproscan |
| IPR022694 | Family | 3-hydroxyacyl-CoA dehydrogenase | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR052242 | Family | Mitochondrial 3-hydroxyacyl-CoA dehydrogenase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43561 | - | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003857 | Molecular Function | 3-hydroxyacyl-CoA dehydrogenase activity | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0006631 | Biological Process | fatty acid metabolic process | Interproscan |
| GO:0006635 | Biological Process | fatty acid beta-oxidation | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0016616 | Molecular Function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Interproscan |
| GO:0070403 | Molecular Function | NAD+ binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00022 | HADH; 3-hydroxyacyl-CoA dehydrogenase | EC:1.1.1.35 | Fatty acid metabolism | ko01212 | PMID: 28812709 |
| Butanoate metabolism | ko00650 | PMID: 28812709 | |||
| Fatty acid elongation | ko00062 | PMID: 28812709 | |||
| Fatty acid degradation | ko00071 | PMID: 28812709 | |||
| Valine, leucine and isoleucine degradation | ko00280 | PMID: 28812709 | |||
| Lysine degradation | ko00310 | PMID: 28812709 | |||
| Tryptophan metabolism | ko00380 | PMID: 28812709 | |||
| Geraniol degradation | ko00281 | PMID: 28812709 | |||
| Caprolactam degradation | ko00930 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_25972-2.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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