Gene detail

Detailed information of Bpl_scaf_2581-2.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_2581-2.10	AHD DOMAIN-CONTAINING PROTEIN	Bpl_scaf_2581	245099	257506	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_2581-2.10

ATGTCAAGTCAGTCTGTCCAAGTTAAGATAGAACTTGGTCATAGAGCCTCACAGAGAGAGAGTCCTTCACCAGATGGTTACACTCATGATTGGACTGTGTATGTTAGAGGACCAGAAGGATGTAATATTGCTCACTTTATTGAAAAGGTTGTTTTTCATCTTCATCAGAGTTTTCCTCATCCAAAAAGAGTTGTAAGTGCTCCTCCGTACCATGTTGCTGAGAGTGGTTACGCAGGTTTCCTGTTGCCCATTGACATTTATTTCAAGAATAAGGAAGAGCCAAAGAAGATCCGTTTCCAGTATGACCTTTTTCTTAAGCTTGATGATACACCAGTAAATCACATACGATGTGAGAAGTTAACATTCCAGAACCCAACTGAAGAATTCAAAAAGAAATTATTGAAAGCTGGAGGAACAACAGTTATTGGGGGCTTGGACAACAGTGGCAGTGGTAAACAGTTTACAGACTTATTTGGTCCTCCTATTACAGCAGATACATGTACAACAAAGAAACCTGAAAAGAAATCATTATCTATAAAGGACAAGGAAAAGGAGAAAAAATCTAAGCACAGTAGTAGTGTAACCTCTGAAAGCTTACCAAAACCTATTGCATCAGTAACGTCCAAATCAAGTGAATCAACTACTCCGAGTTCTAAAGAACATAAAACTTCTACACCTAAGGAAAAACACTCCTCCTCTAAGGCTTTGAAAAGACCTTCAGATGGACATGATGGTAATCCTCCTCTTAAAAAACAGAAAAGAAGTTCTTCAGTATCATCAATACCTTCTGAAGAAAAGGCCAGAAATAAGGCCACTGATTCTGATAAAGATAAGCATAAGCACAAAGAGAAGAAAAAGTCTTCTCCCTCTTTACATAGTTCTCATGAGAAAGATCGAAAAGTTACATCATCATCAGATCATAAATCTAGCTCTCATCACCATGATAAAAAAGAGCATAAATCAAAAATGGATACCTCATCGTCGTCATCAGCAAAAAAGATGAAAGAGGAAACTAAAAAAAATGAAAGTACTGTTAATAGTAGTTTTTCAAAAAAGGATTTTGCTAAAATGAGAAAAAATTCTGTTGATGCTCCTATGAAAAAACGACCTAGGATCTCCGAAAGCAGCAGTAGTAGTGGTAGTGATAGCAGTGGAAGTGATTCTAGTAGTGGATCATCCTCCTCTTCCTCAGATTCAGAATCAGATTTGTCGGACAATGAGAATGAAGTTAAGAAAGATTCTGTTAGTGTTAACATTGATATGGGAAATGATAGTGGTAATGACACTGATATATTTGAAGAAGATACTGCAATAAGCTCGAAGTCATCACCTATGCCCTCATCACATAAACATTCTAAATCTTCCCATCAAAATTCTGAATTTTCAAAGCATTCAAAGAACACACATTCAAATTCAGATTATACACAAAAAAGTTCTAAGTCTACTCCATTGGAGAAACCTCCAACTCCATCTCATAAGACCTCCAAGCCATCCACACCTTCATCACATAAAAGTTCAAAATCTCCACCACAGCAAAAAACTGCTGTACCGTCTCCTTCACCATCTCATAAAAGTTCTACAAAATCTAGTCATAATTCAAAAGAGCATTCCTCTTCAAAGTCAAGCTCCTCCAAAAAGATGAATGAACATGAATTGAAGAAAAGTGAGAAAACATCAGAACATGAATCGAAGAAAAGTGAGAAAACGTTACACGAATCTTCAAAGAAAGAAAAAGTGGACCACAACAAAATTGAAAAAGTGCAAGTATCAGAACAAAAGAAATCTTCTAAAAATAGTAAACACAAAGAAAAAGGAAGTGAAAAACAACAAAAAAATGAACCAGCAAAGGAAACTAAAAATAGAATAGACAATAAAGATAGAGAAACAAAGAGTAAATCAGATAGCAAGGAAAAAGAAATGAAAATTAAAAGTGAAAGTAAAGAAAAAGAAGTCAAAATTAAAAGTGAACCTAAAGAAAAAGAAGTCAAAACTAAAACTGAATGCAAAGAAAAGGAACTTAAAGGTAAAACTGAAAGCAAAGATAAGGAGACAAAGTCCAAACTGGAAAATAAAGAAAAGGAATCTAAGAGTAAAAGTGAAAGTACAAAGGACAAGGAAGTAAAAAACAAAGGTGATTCGAAAGAAAAGGAGTTGAGGCTTAAATATGACAGTAATGACAAGGAAACAAAAGCGAAAACTGAAAATAAAGACATTGAAAAGGCAAAAGACAAAATAAGTAGAGAAAAGAAAGATATATCTGATAGAGACAAAAAAGAAAATAAAAAACATGAATCTTCTTCAAAGGAGAAAAAACATTTAGTAAAGGAAAAGTCCAAGTATGACTCGTCAAAAGACACAAAATTGTCTTCAAAAGAGGGAAAATATAAAGAAAAGGACATAGATAAACAAAGTAAGAGTCTATCTATTACTAAGGAAAGCAAAATTAAGGAAAATATTTCTGATAAGACTAGCATTGATTCACATAAGCTTTTTGAAAGTGTGTCTAAAGACAGAGACAAAGCAGCCAAAGAGGCCAAAGTTAAGGAAATTTCAAAAATATTTCAAGAGGCAAAAAGTTCTAGTAAGGAAAATAGAAATAAAGAAAATGATGACAAAGTTAAATCCAACAAACTTTCTGCTAGCAGTGGAAAAGAATTGAAAAAGAAAGATGGGTATGAATCTGTTGTGAAGAATCTTGAATCTCCCGTTAAGACTGAAAAAATAATTGAGGCAGATATGAAAAAAGAAGTGATTAAGAAGGAAGTTATAGAAGAGAAAGTGTCAAAGACAGGAAACATACTGAAGGAAACGAAAAGTGATTCTAAATCAAATTCACAGGAGGAAAAAAATCTGCCCATTTCCAAGACTGAAATTGTGCCGAAAGAAGAAGAAACCGCAGATATATTATCTGAAGAAACACTTGACAATTTAGGGAAAGCTCCAAATGGCGAGGATTTGTACTCTCTGTTAGAGTTGCATGCAAAACTTGAAAGTATACAAGATGCAATGGTTTTAGAAAAAGTAGTTCTTGCAATACAGGAAACTGGTATGTACAATGTAGGGGAGACAACCTTTGATTTCGACCTCTGTGTATTAGACAGTAAGACAGTGAGGCAAATTGAAAATTTTATAAGTAATAATGCTGTGTCAGCAATGTAA

Transcript

Bpl_scaf_2581-2.10

CCGGTATTACATGCTGTTGATTTTCCGCATAATGAAGTTATTGTGGAAGAAGATGTTCTTTGTGTTTATATGTTTTCCATTCGTTAATTAATAAAAGGAAAACGAGATATCAGGAGATAAACATAAAATGTCAAGTCAGTCTGTCCAAGTTAAGATAGAACTTGGTCATAGAGCCTCACAGAGAGAGAGTCCTTCACCAGATGGTTACACTCATGATTGGACTGTGTATGTTAGAGGACCAGAAGGATGTAATATTGCTCACTTTATTGAAAAGGTTGTTTTTCATCTTCATCAGAGTTTTCCTCATCCAAAAAGAGTTGTAAGTGCTCCTCCGTACCATGTTGCTGAGAGTGGTTACGCAGGTTTCCTGTTGCCCATTGACATTTATTTCAAGAATAAGGAAGAGCCAAAGAAGATCCGTTTCCAGTATGACCTTTTTCTTAAGCTTGATGATACACCAGTAAATCACATACGATGTGAGAAGTTAACATTCCAGAACCCAACTGAAGAATTCAAAAAGAAATTATTGAAAGCTGGAGGAACAACAGTTATTGGGGGCTTGGACAACAGTGGCAGTGGTAAACAGTTTACAGACTTATTTGGTCCTCCTATTACAGCAGATACATGTACAACAAAGAAACCTGAAAAGAAATCATTATCTATAAAGGACAAGGAAAAGGAGAAAAAATCTAAGCACAGTAGTAGTGTAACCTCTGAAAGCTTACCAAAACCTATTGCATCAGTAACGTCCAAATCAAGTGAATCAACTACTCCGAGTTCTAAAGAACATAAAACTTCTACACCTAAGGAAAAACACTCCTCCTCTAAGGCTTTGAAAAGACCTTCAGATGGACATGATGGTAATCCTCCTCTTAAAAAACAGAAAAGAAGTTCTTCAGTATCATCAATACCTTCTGAAGAAAAGGCCAGAAATAAGGCCACTGATTCTGATAAAGATAAGCATAAGCACAAAGAGAAGAAAAAGTCTTCTCCCTCTTTACATAGTTCTCATGAGAAAGATCGAAAAGTTACATCATCATCAGATCATAAATCTAGCTCTCATCACCATGATAAAAAAGAGCATAAATCAAAAATGGATACCTCATCGTCGTCATCAGCAAAAAAGATGAAAGAGGAAACTAAAAAAAATGAAAGTACTGTTAATAGTAGTTTTTCAAAAAAGGATTTTGCTAAAATGAGAAAAAATTCTGTTGATGCTCCTATGAAAAAACGACCTAGGATCTCCGAAAGCAGCAGTAGTAGTGGTAGTGATAGCAGTGGAAGTGATTCTAGTAGTGGATCATCCTCCTCTTCCTCAGATTCAGAATCAGATTTGTCGGACAATGAGAATGAAGTTAAGAAAGATTCTGTTAGTGTTAACATTGATATGGGAAATGATAGTGGTAATGACACTGATATATTTGAAGAAGATACTGCAATAAGCTCGAAGTCATCACCTATGCCCTCATCACATAAACATTCTAAATCTTCCCATCAAAATTCTGAATTTTCAAAGCATTCAAAGAACACACATTCAAATTCAGATTATACACAAAAAAGTTCTAAGTCTACTCCATTGGAGAAACCTCCAACTCCATCTCATAAGACCTCCAAGCCATCCACACCTTCATCACATAAAAGTTCAAAATCTCCACCACAGCAAAAAACTGCTGTACCGTCTCCTTCACCATCTCATAAAAGTTCTACAAAATCTAGTCATAATTCAAAAGAGCATTCCTCTTCAAAGTCAAGCTCCTCCAAAAAGATGAATGAACATGAATTGAAGAAAAGTGAGAAAACATCAGAACATGAATCGAAGAAAAGTGAGAAAACGTTACACGAATCTTCAAAGAAAGAAAAAGTGGACCACAACAAAATTGAAAAAGTGCAAGTATCAGAACAAAAGAAATCTTCTAAAAATAGTAAACACAAAGAAAAAGGAAGTGAAAAACAACAAAAAAATGAACCAGCAAAGGAAACTAAAAATAGAATAGACAATAAAGATAGAGAAACAAAGAGTAAATCAGATAGCAAGGAAAAAGAAATGAAAATTAAAAGTGAAAGTAAAGAAAAAGAAGTCAAAATTAAAAGTGAACCTAAAGAAAAAGAAGTCAAAACTAAAACTGAATGCAAAGAAAAGGAACTTAAAGGTAAAACTGAAAGCAAAGATAAGGAGACAAAGTCCAAACTGGAAAATAAAGAAAAGGAATCTAAGAGTAAAAGTGAAAGTACAAAGGACAAGGAAGTAAAAAACAAAGGTGATTCGAAAGAAAAGGAGTTGAGGCTTAAATATGACAGTAATGACAAGGAAACAAAAGCGAAAACTGAAAATAAAGACATTGAAAAGGCAAAAGACAAAATAAGTAGAGAAAAGAAAGATATATCTGATAGAGACAAAAAAGAAAATAAAAAACATGAATCTTCTTCAAAGGAGAAAAAACATTTAGTAAAGGAAAAGTCCAAGTATGACTCGTCAAAAGACACAAAATTGTCTTCAAAAGAGGGAAAATATAAAGAAAAGGACATAGATAAACAAAGTAAGAGTCTATCTATTACTAAGGAAAGCAAAATTAAGGAAAATATTTCTGATAAGACTAGCATTGATTCACATAAGCTTTTTGAAAGTGTGTCTAAAGACAGAGACAAAGCAGCCAAAGAGGCCAAAGTTAAGGAAATTTCAAAAATATTTCAAGAGGCAAAAAGTTCTAGTAAGGAAAATAGAAATAAAGAAAATGATGACAAAGTTAAATCCAACAAACTTTCTGCTAGCAGTGGAAAAGAATTGAAAAAGAAAGATGGGTATGAATCTGTTGTGAAGAATCTTGAATCTCCCGTTAAGACTGAAAAAATAATTGAGGCAGATATGAAAAAAGAAGTGATTAAGAAGGAAGTTATAGAAGAGAAAGTGTCAAAGACAGGAAACATACTGAAGGAAACGAAAAGTGATTCTAAATCAAATTCACAGGAGGAAAAAAATCTGCCCATTTCCAAGACTGAAATTGTGCCGAAAGAAGAAGAAACCGCAGATATATTATCTGAAGAAACACTTGACAATTTAGGGAAAGCTCCAAATGGCGAGGATTTGTACTCTCTGTTAGAGTTGCATGCAAAACTTGAAAGTATACAAGATGCAATGGTTTTAGAAAAAGTAGTTCTTGCAATACAGGAAACTGGTATGTACAATGTAGGGGAGACAACCTTTGATTTCGACCTCTGTGTATTAGACAGTAAGACAGTGAGGCAAATTGAAAATTTTATAAGTAATAATGCTGTGTCAGCAATGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03366	YEATS	YEATS family	Domain	Interproscan
PF17793	AHD	ANC1 homology domain (AHD)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005033	Family	YEATS	Interproscan
IPR038704	Homologous_superfamily	YEATS superfamily	Interproscan
IPR040930	Domain	AF-9, ANC1 homology domain	Interproscan
IPR052790	Family	YEATS domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47827	AHD DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008023	Cellular Component	transcription elongation factor complex	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0070577	Molecular Function	lysine-acetylated histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15187	MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3	-	Transcriptional misregulation in cancers	ko05202	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_2581-2.10 global RNA-seq network