Detailed information of Bpl_scaf_25767-0.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_25767-0.7FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEBpl_scaf_257671866330606+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06839zf-GRFGRF zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000214DomainZinc finger, DNA glycosylase/AP lyase-typeInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR010666DomainZinc finger, GRF-typeInterproscan
IPR010979Homologous_superfamilySmall ribosomal subunit protein uS13-like, H2THInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22993FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016799Molecular Functionhydrolase activity, hydrolyzing N-glycosyl compoundsInterproscan
GO:0019104Molecular FunctionDNA N-glycosylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10569NEIL3; endonuclease VIII-like 3-Base excision repair ko03410PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_25767-0.7 global RNA-seq network
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