| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_25756-1.38 | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT | Bpl_scaf_25756 | 65413 | 97559 | + |
| CDS | |||||
| Bpl_scaf_25756-1.38 | |||||
| Transcript |
| Bpl_scaf_25756-1.38 |
| Protein |
| Bpl_scaf_25756-1.38 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00136 | DNA_pol_B | DNA polymerase family B | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006134 | Domain | DNA-directed DNA polymerase, family B, multifunctional domain | Interproscan |
| IPR006172 | Family | DNA-directed DNA polymerase, family B | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR023211 | Homologous_superfamily | DNA polymerase, palm domain superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR042087 | Homologous_superfamily | DNA polymerase family B, thumb domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR045846 | Domain | DNA polymerase alpha catalytic subunit, catalytic domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45861 | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003682 | Molecular Function | chromatin binding | Interproscan |
| GO:0003688 | Molecular Function | DNA replication origin binding | Interproscan |
| GO:0003697 | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0003887 | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0005658 | Cellular Component | alpha DNA polymerase:primase complex | Interproscan |
| GO:0006272 | Biological Process | leading strand elongation | Interproscan |
| GO:0006273 | Biological Process | lagging strand elongation | Interproscan |
| GO:1902975 | Biological Process | mitotic DNA replication initiation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K02320 | POLA1; DNA polymerase alpha subunit A | EC:2.7.7.7 | Purine metabolism | ko00230 | PMID: 28812709 |
| Pyrimidine metabolism | ko00240 | PMID: 28812709 | |||
| DNA replication | ko03030 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_25756-1.38 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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