Gene detail

Detailed information of Bpl_scaf_25338-4.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_25338-4.12	CATION TRANSPORTING ATPASE	Bpl_scaf_25338	471230	505392	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_25338-4.12

ATGATAGGTACTCATGTTATGGAAGGAAGCGGTAAAATGTTGGTTACAGCTGTTGGTATTAATTCACAAACTGGTATCATTTTTGCCCTTTTGGGAGCCTCTCAAGGTGAAGAAGAAAAAAAGAAAGAAAAGGAAAAGAAAAACGGCAAGAAAAAGAGTGATGGCCCTAATGAAGGTTCACAGACTAACACCGCAGGACAGACCGTACCATTGCTTACTAGAGACGCCGATGTTAAAGTGGATCTTGGATCCATTAATCCTGAAGTGCCAACAGGAAACTCTCATAACTCTAACAATTCCAATGCAGTTAATAATAAAGCAAACAATGCTAATGACGAGGAACCAAAGAAACCACACGAATCGGCACGGAAAGAGAAGTCAGTATTACAGGCAAAACTCACTAGATTAGCTATCCAAATTGGTTATGGAGGTACTGCTATTGCTGTCTTTACTGTAATAATTCTCATTGTCAAATTCTGTATCAGAGAGTTTGCCATCAACAAAAATGAATGGACAAGCGACAAGACCGCTGGCTACATTGAACATTTTGTTAAACATTTCATTATTGGTGTGACTGTGTTAGTCGTAGCTGTGCCTGAAGGTCTTCCGTTAGCTGTTACTCTGTCGTTGGCTTATTCTGTTAGAAAAATGATGGATGACAATAATTTGGTACGACATTTAGATGCTTGTGAAACAATGGGTAATGCTACAGCTATCTGTTCAGATAAAACTGGAACATTGACAACTAATAGAATGACAGTTGTACAGAGTTACCTCGGAGGTATACATTATAAACAGATTCCAAACTTTGATACATTGGCAGGCAGGTTTAAAGAATTATTAGTTCAGAGCATAGCAATCAACAGTGGATATACTTCCAGAATTCAGGCAGCAGAGGAGAAAGGAGGACTACCAAAGCAGCTAGGTAACAAAACAGAATGTGCTCTCCTAGGATTTGTAATGGACATGAAACAAGATTACCAAGCAGTCAGAGACGAAGTACCAGAGGAAATGCTTACTAAAGTATTCACCTTTAATTCTGTTAGAAAGTCAATGAGTACTGTCATTCCTAAGGAAAATGGCTTCCGACTCTTTACAAAAGGAGCTTCAGAAATTGTATTAAAAAAATGTACTCACATCATAGACTGTCAAGGTGAAATTAAACCTTTCTCTGAAGAGGACCAGGACAATATTGTCAAAACCGTGATTGAAACTATGGCTAGCGATGGTCTACGTACAATCTGTGTTGCTTACAAAGATTTTGTCCGAGGTGAAAAAATTGAAGAGAGTGATGTGGCATTCACAAAAGAACCTAATTGGGATGAAGAAGGAGATATTATCAAGGACCTTACCTGTATTTTAGTTGTTGGCATTGAAGATCCTGTCAGACCTGAGGTACCTAATGCTATTAAGAAATGTAAGAAGGCTGGTATTTGTGTGAGAATGGTAACTGGTGACAATGTTAACACTGCTAGATCTATTGCTTCTAAATGTGGTATATTGGAGCCTACAGAAAACTTCTTGGTAATAGATGGAAAAGAATTCAATAAAAGAATTAGGGATGAAGACGGAGAGGTTTCGCAGGAACTGTTTGACAAAGTTTGGCCTAATTTACGTGTGTTGGCTCGGTCATCCCCTCAAGATAAATATGTCTTGGTTAAAGGTATAATTGACAGTAAACTGACTGTAGCCAGAGAAGTAGTCGCTGTGACTGGTGATGGAACCAATGATGGACCTGCTCTTAAAAAGGCTGATGTTGGATTCGCTATGGGTATTTCTGGAACTGATGTTGCCAAGGAAGCTTCAGATATTATTCTAACAGATGATAATTTTACAAGTATTGTAAAGGCTGTGATGTGGGGTAGAAATGTGTACGATAGTATTGCTAAATTCTTGCAGTTTCAATTAACTGTCAACGTTGTAGCTGTTCTTGTTGCTTTCCTTGGTGCTTGCATTATAGATGACAGTCCTCTTAGAGCTATACAGATGTTATGGGTGAACTTGATAATGGACACTCTGGCTTCTCTAGCTCTGGCAACAGAACTTCCCAGTGAAGAGCTCCTAGAACGTAAACCTTATGGCAGAACTAAGGCTCTTATTTCTAGAACAATGATGAAAAATATTACAGGCCATGCCATTTATCAGCTTATTGTTATATTTGTTTTACTTTTCGCAGGATCTACATTTTTTGACATTGATGATGGAAGAGGAGGTGATATTCATTCTCCACCTACTCAACACTTTACTATTATTTTTAATACATTTGTTATGATGACTCTGTGTAACGAGGTTAATGCTAGAAAAATCCATGGGCAGCGTAATATTTTAGAAGGATTAAGAAGGAATCCAGTGTTTATAGGTATCTGGATTGGCACCTTTGTAGCTCAGATAGTTATAGTTCAGTTTGGAAGCTTTGCTTTTAGCACCAAAAGTTTGACATTAGAACAATGGTTTTGGTGTTTGTTTTTAGGGATAGGATCTCTAATATGGGGACAGCTTATTACATGTGTTCCAACAAATGCTATACCTAAAAATCTTTGCCGTCGATTCCGTGGCAAACAAACTAGACAAGAACAAATTGATGCTGATATGGAAGACCAGGATGATGTCAGTGGAAGGCGTGGCCAGATCTTGTGGGTCAGGGGATTAACAAGACTCCAGCAACAGATTCGTGTTGTTAATGCTTTCCGCATGGGCTTAGATGCACGTTATGACAGTAATAGTATGTCATCAATACACAGTTACCATTCCTTACAAAACCTAAAGAATCGTAAATCCAAACCCATTTCCTCTCCCTCAGTCGAAGATGGGGCTACTGCCGAAACTCAGTTTAATAATTGA

Transcript

Bpl_scaf_25338-4.12

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF00689	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF12424	ATP_Ca_trans_C	Plasma membrane calcium transporter ATPase C terminal	Family	Interproscan
PF13246	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001757	Family	P-type ATPase	Interproscan
IPR006068	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan
IPR006408	Family	P-type ATPase, subfamily IIB	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR022141	Domain	Plasma membrane calcium transporting P-type ATPase, C-terminal	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR044492	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24093	CATION TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005388	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051480	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan
GO:0070588	Biological Process	calcium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05850	ATP2B; Ca2+ transporting ATPase, plasma membrane	EC:3.6.3.8	Calcium signaling pathway	ko04020	PMID: 28812709
			cAMP signaling pathway	ko04024	PMID: 28812709
			cGMP - PKG signaling pathway	ko04022	PMID: 28812709
			Adrenergic signaling in cardiomyocytes	ko04261	PMID: 28812709
			Salivary secretion	ko04970	PMID: 28812709
			Pancreatic secretion	ko04972	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_25338-4.12 global RNA-seq network