| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_24996-7.11 | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | Bpl_scaf_24996 | 767060 | 782972 | - |
| CDS | |||||
| Bpl_scaf_24996-7.11 | |||||
| Transcript |
| Bpl_scaf_24996-7.11 |
| Protein |
| Bpl_scaf_24996-7.11 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02225 | PA | PA domain | Family | Interproscan |
| PF13639 | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR003137 | Domain | PA domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR046450 | Homologous_superfamily | PA domain superfamily | Interproscan |
| IPR051826 | Family | E3 ubiquitin-protein ligase domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22765 | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15692 | RNF13, RZF; E3 ubiquitin-protein ligase RNF13 | EC:2.3.2.27 | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_24996-7.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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