Detailed information of Bpl_scaf_24996-17.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_24996-17.7DAMAGE-SPECIFIC DNA BINDING PROTEIN 2Bpl_scaf_2499616821891693344-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR033312FamilyDNA damage-binding protein 2Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15169DAMAGE-SPECIFIC DNA BINDING PROTEIN 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0009411Biological Processresponse to UVInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10140DDB2; DNA damage-binding protein 2-Ubiquitin mediated proteolysis ko04120PMID: 28812709
Nucleotide excision repair ko03420PMID: 28812709
p53 signaling pathway ko04115PMID: 28812709
Colorectal cancer ko05210PMID: 28812709
Hepatitis B ko05161PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_24996-17.7 global RNA-seq network
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