| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_24966-7.8 | SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES | Bpl_scaf_24966 | 703308 | 736746 | + |
| CDS | |||||
| Bpl_scaf_24966-7.8 | |||||
| Transcript |
| Bpl_scaf_24966-7.8 |
| Protein |
| Bpl_scaf_24966-7.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03343 | SART-1 | SART-1 family | Family | Interproscan |
| PF19252 | HIND | HIND motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005011 | Family | SNU66/SART1 family | Interproscan |
| IPR045347 | Conserved_site | HIND motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14152 | SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0000481 | Biological Process | maturation of 5S rRNA | Interproscan |
| GO:0045292 | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11984 | SART1, HAF, SNU66; U4/U6.U5 tri-snRNP-associated protein 1 | - | Spliceosome | ko03040 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_24966-7.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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