Detailed information of Bpl_scaf_24692-2.12 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_24692-2.12TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATEDBpl_scaf_24692226561233867+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01974tRNA_int_endotRNA intron endonuclease, catalytic C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006676FamilytRNA-splicing endonucleaseInterproscan
IPR006677DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR011856Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR016690FamilytRNA-splicing endonuclease, SEN34 subunitInterproscan
IPR036167Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13070TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000213Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0000214Cellular ComponenttRNA-intron endonuclease complexInterproscan
GO:0000379Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15323TSEN34; tRNA-splicing endonuclease subunit Sen34EC:4.6.1.16
Transfer RNA biogenesisko03016PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_24692-2.12 global RNA-seq network
TOP