Detailed information of Bpl_scaf_24428-2.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_24428-2.3SYNAPTIC ADHESION-LIKE MOLECULE SALMBpl_scaf_24428262576264129+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000372DomainLeucine-rich repeat N-terminal domainInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050467FamilyLeucine-rich repeat and fibronectin type-III domain-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45842SYNAPTIC ADHESION-LIKE MOLECULE SALMInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16358LRFN5, SALM5; leucine-rich repeat and fibronectin type-III domain-containing protein 5-Domain-containing proteins not elsewhere classifiedko04990PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_24428-2.3 global RNA-seq network
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