Gene detail

Detailed information of Bpl_scaf_24309-1.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_24309-1.9	CYTOKINE RECEPTOR	Bpl_scaf_24309	190643	229009	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_24309-1.9

ATGAAGCCACTGTGGATGTTAATTTCTGTATTTTTACAAACAGCATATATTGGTGGATATAAACGGAATGTCTTCCCTGGAGTTGTTCGTCCAAATGACCCTTATGTATTCATCGACCATGACTTGAAGCTGACTTGTAACTTGACAACTGCTATCTCGGAAACTTCAGCATCGCTTTTCTTCACAAAAGGTGGTAATCCGATCCCAAAATCTTATGTACATATCCTGAGTAGCCGTAGTATACAGCTTATCTATCCAATAGTATCACCAGAAGATGAAGGGAATTATGTGTGTAAGCTGAACAGAACAGGAGGAGGGCGTCCTTACACTATAGGAAATCAGCTCGTCCGTGTAGATTATGAACCTAAGAAAGTAGAGGCAATAGAATGTAGAGTTTATAACTGGGAGAAGATGACATGTGAATGGAACCTGGGTGTTAATTATAGCCATTATGAACATATTGATGTACAACTAGTATGGACAGTCAGGGGTGCTCAACAATATGACTGTCCTCATATAACTACAAATTCTTGCCATTGGAAAGCCATAGATGGACGAGATGGTTTTCACCCTGGAATGCTGTACTATATGATGGTTATAGTACGGAATAAAAAAACAGGAAACGAAACAAAGTCAAAGTTATTTAAAGAAGACACCAAAACACTTGTACAACCCAGCAGTGTTTCTAGTCTGACTACTTCTCACAACAGTACATGCCTGCGGTTACAGTGGCACCATAGCAAATCCCAACAGGAAAAAATATATAGGATACAATATATATCTCGATGGCAAGCTTCGTGGAAGGTTTTAAATTTAGATGATGTTACTGAAAAGACAATCTGTGATTTAGTACCCAATACAGAGTATACAATTAAAATTGCATGTAAACCATTATGGGATGGATTCTGGAGTGACGAGGTCGAAACAACGATCAAATTAGACGAGGATGTACCAGGAGCTTCTCCTGAATTACAGCCTGGTGGATTTGTAGAGAAACCATGTCATTTTAAGGATTGTCGTGTGATTACAGTATATTGGAGGCCTATTATGGACAGACTAGCTAATGGGGACATCACCAATTACAAGTTAACAGCACTTGATAGAGACGGACTGGATTCTCCTATACAAATATATACTGGTACCCGTACCTCTGGACAATTGATGCTATCAGCAGGGAAGGACTATGTTGTTGATATTCAAGGGAAAACGAAAAAAGGCATTTCTCCTCACAGAGCAAGTGTTTTGATATTGGCTAAGACAAAAAAGCCGCCTTACCCTACTAATTTTATTGTTGAAGCTTATAACAGAGCAGATTTACCACATAAGTTCAGTTTAGATATCAAATGGACAGAGCCAACAACAAAACAAAGGATTCTGGGATATACATTATTTTCGTGTAAAGGTTCTAGCAGTGACCAAATGTGTTTGGAACCTCTAAAGTGGGCGGTATTGAAAGGAAATCAAAATAATTTTTCCATGACTGTACGAGAAGCTGAGATGCAGAGTTTATTGTATGGAATTTCCATGGAAACCAAACACTCTTCAGGAGAGACCGTCAGCAGTGGTATTTTGTGGAATAACTGCATTTACAGAAAAAACAGAAAGCCTCTAATGGCCCCCAAAAATGTAAGAGTGTTGTCATTGATTGAAGAAAATAGTTTACAAGTAGAATGGGATAGATTTAAATGTTCCGAGATGTCGGGGTACATTACACGTTACAGTGTCTACTATTGCTCCTCCCAGACAGAACAGAATTGTAGTGGTCAGTATTTCGTCATAGATGTTGATGGTCATAAGACTAGCGTCACCCTGAAGGATATGTATCCTAAGGCTACATACAGAGTATGGGTTCAGGCTAAATCACAGGCAGGGGCAGGTCCCCAGTCAGACCCAGTCTATACCACAATACCTGTTACTGGTATATCTTTAACAACAGATGAGATTGCCGGAATTGTCATTTCTATATTATTGGTTATTTGTCTGGCTCTTATTGGATTCTATTGTTTGTTTAGGAGATGTGCTGTTGAAGTGAAGGAACAGTTTAAGCCATATGACATTGATTTACCCAATGTGCCATTGCCTCCTATTCCTATGCCAAGACCAAGTTCTAAAGCATCAACATCACCAGATTCAGATGATGACATTTATTCTAAGATTCCAGAAAATCCTCCATCGCCCACTCTACCTGAGTCTATGTCTATAGATATGCCACTCATTAATCGTTCTGAGTCACAAAACAAGTCAGTTTATGGAGACAAAAGAAAGTTGTATGCCAAATTTCCTAGTTCGGCTGCAGAAACTCTTTTATCACGTTTCAGTATTGGACGAAATAGTGCAGAATTTAGAGATAACAAAAATCTAAGTACATTTAGACCACGTCCTAAAAAGGGATCAAGTGGACTTTCGGGTAGTGCTGATATGCTATCTAGTAACGTTTCACCTTACAGCTGTGTAGATATAGTGCAATGTCCAAATTCTGAGAAAATTCCCAGGAAACTTATTCCTTGTAAGAAACCTTGTCATAGTGTTGGAAGTATGGTAGACGACCCTACTTATGAAACAAACAATTTATCTGTGTTGTCTAACAAAGTAGTGACTAACCCTCCTTCGTCATTAGCTATTGACGATTCTAGGGAGCATTTTAACATCAAATTGCCTCTTGATCGTAGAAAAAGTGACTTAATGAATAATACATTGAACAGCTGTGTCTCGAATGAGATCAATTCAGTAATGGAAACTGATGAGGAGACTCAAGACTCTAATGAAATATCAGAGGACAAAATGTCATCTTATGTGCAAGGTGCCCAACTTTTAGAAATAGACAATTCTACGTTTGTACCAGCTGATGACTATGTGCAAGACCCGTCATGTCCAAAATGTTCAAACAATAATGACATCAAAATGAGGAATGGATATGTTCTTACTATGGAAAATATAACGCAAATTCTTCCTAAACCTAGCATTGTAATAGAGGATGAGGATGAAGGAGAGGGAGATACATATAAAAAAGAACTGAATATTAAACCTGGTCCACGACCAGTCAGTGAGGTTATAAATGTTCCGGCTCATTTCTACGGCTCTTTGTCATTGTTAGATACTGGCACTGCTACAGAGCTTTGA

Transcript

Bpl_scaf_24309-1.9

TGGAGTTGACATAAGTAAATATGTGATTATGTGGAATTATACACCTGAATGATAGATGATTTGGTGAGCATTGTTACATGTACCTGCCCAATACATGACAATAATTGACAGAGGCTGCAATGAGAAGGAAAGAAGATGAAGCCACTGTGGATGTTAATTTCTGTATTTTTACAAACAGCATATATTGGTGGATATAAACGGAATGTCTTCCCTGGAGTTGTTCGTCCAAATGACCCTTATGTATTCATCGACCATGACTTGAAGCTGACTTGTAACTTGACAACTGCTATCTCGGAAACTTCAGCATCGCTTTTCTTCACAAAAGGTGGTAATCCGATCCCAAAATCTTATGTACATATCCTGAGTAGCCGTAGTATACAGCTTATCTATCCAATAGTATCACCAGAAGATGAAGGGAATTATGTGTGTAAGCTGAACAGAACAGGAGGAGGGCGTCCTTACACTATAGGAAATCAGCTCGTCCGTGTAGATTATGAACCTAAGAAAGTAGAGGCAATAGAATGTAGAGTTTATAACTGGGAGAAGATGACATGTGAATGGAACCTGGGTGTTAATTATAGCCATTATGAACATATTGATGTACAACTAGTATGGACAGTCAGGGGTGCTCAACAATATGACTGTCCTCATATAACTACAAATTCTTGCCATTGGAAAGCCATAGATGGACGAGATGGTTTTCACCCTGGAATGCTGTACTATATGATGGTTATAGTACGGAATAAAAAAACAGGAAACGAAACAAAGTCAAAGTTATTTAAAGAAGACACCAAAACACTTGTACAACCCAGCAGTGTTTCTAGTCTGACTACTTCTCACAACAGTACATGCCTGCGGTTACAGTGGCACCATAGCAAATCCCAACAGGAAAAAATATATAGGATACAATATATATCTCGATGGCAAGCTTCGTGGAAGGTTTTAAATTTAGATGATGTTACTGAAAAGACAATCTGTGATTTAGTACCCAATACAGAGTATACAATTAAAATTGCATGTAAACCATTATGGGATGGATTCTGGAGTGACGAGGTCGAAACAACGATCAAATTAGACGAGGATGTACCAGGAGCTTCTCCTGAATTACAGCCTGGTGGATTTGTAGAGAAACCATGTCATTTTAAGGATTGTCGTGTGATTACAGTATATTGGAGGCCTATTATGGACAGACTAGCTAATGGGGACATCACCAATTACAAGTTAACAGCACTTGATAGAGACGGACTGGATTCTCCTATACAAATATATACTGGTACCCGTACCTCTGGACAATTGATGCTATCAGCAGGGAAGGACTATGTTGTTGATATTCAAGGGAAAACGAAAAAAGGCATTTCTCCTCACAGAGCAAGTGTTTTGATATTGGCTAAGACAAAAAAGCCGCCTTACCCTACTAATTTTATTGTTGAAGCTTATAACAGAGCAGATTTACCACATAAGTTCAGTTTAGATATCAAATGGACAGAGCCAACAACAAAACAAAGGATTCTGGGATATACATTATTTTCGTGTAAAGGTTCTAGCAGTGACCAAATGTGTTTGGAACCTCTAAAGTGGGCGGTATTGAAAGGAAATCAAAATAATTTTTCCATGACTGTACGAGAAGCTGAGATGCAGAGTTTATTGTATGGAATTTCCATGGAAACCAAACACTCTTCAGGAGAGACCGTCAGCAGTGGTATTTTGTGGAATAACTGCATTTACAGAAAAAACAGAAAGCCTCTAATGGCCCCCAAAAATGTAAGAGTGTTGTCATTGATTGAAGAAAATAGTTTACAAGTAGAATGGGATAGATTTAAATGTTCCGAGATGTCGGGGTACATTACACGTTACAGTGTCTACTATTGCTCCTCCCAGACAGAACAGAATTGTAGTGGTCAGTATTTCGTCATAGATGTTGATGGTCATAAGACTAGCGTCACCCTGAAGGATATGTATCCTAAGGCTACATACAGAGTATGGGTTCAGGCTAAATCACAGGCAGGGGCAGGTCCCCAGTCAGACCCAGTCTATACCACAATACCTGTTACTGGTATATCTTTAACAACAGATGAGATTGCCGGAATTGTCATTTCTATATTATTGGTTATTTGTCTGGCTCTTATTGGATTCTATTGTTTGTTTAGGAGATGTGCTGTTGAAGTGAAGGAACAGTTTAAGCCATATGACATTGATTTACCCAATGTGCCATTGCCTCCTATTCCTATGCCAAGACCAAGTTCTAAAGCATCAACATCACCAGATTCAGATGATGACATTTATTCTAAGATTCCAGAAAATCCTCCATCGCCCACTCTACCTGAGTCTATGTCTATAGATATGCCACTCATTAATCGTTCTGAGTCACAAAACAAGTCAGTTTATGGAGACAAAAGAAAGTTGTATGCCAAATTTCCTAGTTCGGCTGCAGAAACTCTTTTATCACGTTTCAGTATTGGACGAAATAGTGCAGAATTTAGAGATAACAAAAATCTAAGTACATTTAGACCACGTCCTAAAAAGGGATCAAGTGGACTTTCGGGTAGTGCTGATATGCTATCTAGTAACGTTTCACCTTACAGCTGTGTAGATATAGTGCAATGTCCAAATTCTGAGAAAATTCCCAGGAAACTTATTCCTTGTAAGAAACCTTGTCATAGTGTTGGAAGTATGGTAGACGACCCTACTTATGAAACAAACAATTTATCTGTGTTGTCTAACAAAGTAGTGACTAACCCTCCTTCGTCATTAGCTATTGACGATTCTAGGGAGCATTTTAACATCAAATTGCCTCTTGATCGTAGAAAAAGTGACTTAATGAATAATACATTGAACAGCTGTGTCTCGAATGAGATCAATTCAGTAATGGAAACTGATGAGGAGACTCAAGACTCTAATGAAATATCAGAGGACAAAATGTCATCTTATGTGCAAGGTGCCCAACTTTTAGAAATAGACAATTCTACGTTTGTACCAGCTGATGACTATGTGCAAGACCCGTCATGTCCAAAATGTTCAAACAATAATGACATCAAAATGAGGAATGGATATGTTCTTACTATGGAAAATATAACGCAAATTCTTCCTAAACCTAGCATTGTAATAGAGGATGAGGATGAAGGAGAGGGAGATACATATAAAAAAGAACTGAATATTAAACCTGGTCCACGACCAGTCAGTGAGGTTATAAATGTTCCGGCTCATTTCTACGGCTCTTTGTCATTGTTAGATACTGGCACTGCTACAGAGCTTTGATTTTCTGTTATTGTTTCCTTTAAAAGTGTGTGGTAGAGTATGAAGGGGTGGGGGGGGACATTCTGTGCTGTGGGCTATTAATAGTCTTGTGACCGCATCTGGAACATAACAAATTCTTGGAAAAAAAATTACATTGGGCTCTGTGAGTTAATACTCTTGTGACCTTATGTGGAACATACCAAACTGTCGGAAAAAAGTACATTGATTTTTAAGTCCACTTTTAAACTCCCTTCCTACCTTGCCATATACTTTTTAATGGAACAACCCATTATTATTACTCAATGTACTTAAAGTGCTATGCTGGTTTACATATTTCTTTTACCACATCTTTGTAAACTATAGTGCAGTTATGATCTGTAAATAATTCCAGATATTTGTTTACTTTGCCCATGATCTTTTTACCTGTTTTTAAGAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00047	ig	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013151	Domain	Immunoglobulin	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19599	DOME; cytokine receptor domeless	-	Jak-STAT signaling pathway	ko04630	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_24309-1.9 global RNA-seq network