| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_24250-0.7 | TRANSKETOLASE | Bpl_scaf_24250 | 38221 | 44820 | + |
| CDS | |||||
| Bpl_scaf_24250-0.7 | |||||
| Transcript |
| Bpl_scaf_24250-0.7 |
| Protein |
| Bpl_scaf_24250-0.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02779 | Transket_pyr | Transketolase, pyrimidine binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005475 | Domain | Transketolase-like, pyrimidine-binding domain | Interproscan |
| IPR009014 | Homologous_superfamily | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II | Interproscan |
| IPR020826 | Binding_site | Transketolase binding site | Interproscan |
| IPR029061 | Homologous_superfamily | Thiamin diphosphate-binding fold | Interproscan |
| IPR051424 | Family | Transketolase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43195 | TRANSKETOLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004802 | Molecular Function | transketolase activity | Interproscan |
| GO:0030976 | Molecular Function | thiamine pyrophosphate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00615 | E2.2.1.1, tktA, tktB; transketolase | EC:2.2.1.1 | Carbon metabolism | ko01200 | PMID: 28812709 |
| Biosynthesis of amino acids | ko01230 | PMID: 28812709 | |||
| Pentose phosphate pathway | ko00030 | PMID: 28812709 | |||
| Carbon fixation in photosynthetic organisms | ko00710 | PMID: 28812709 | |||
| Biosynthesis of ansamycins | ko01051 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_24250-0.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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