Gene detail

Detailed information of Bpl_scaf_24074-0.11 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_24074-0.11	CYTIDYLYLTRANSFERASE	Bpl_scaf_24074	39387	66178	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_24074-0.11

CGTTTATACAAGAGCACAGACGAAATTTATAATACGACGAAATTTCATGATAACAAATGCTCACGCGACAATGACAAATAAGTGAATTACATTTTATTGCTTTGATTGGTTACAGTGACTGGTTTGAAGTTATCTCACGCTGATTTTGTCAAAGGATATCCAAATATTTCCATTTGAAATCAAATTGATTTGTTGTCATGATCAACTGTTAATATGTCCAGTGGAAGGAAGAGGAACAGGAATGGCGATTTCACATCAGACAGCCCTCCATCCACCACAACACCAACTCTTACAGAAGATTTTGTTAGACGTCAGGTCTGTGGACCAGCACCAAGAAGTACAGATGAAGCTGCTCAAAGAGAAAGGGACCAAATTGACTACACAATTAAAATTGATCTTGATGATGCCAAAGCAAACAAAGCCCCTAGAAGAGTAAGGATCTATGCAGATGGTATATATGATATGTTTCATTCTGGTCATGCCAGACAGTTAATGCAGGTGAAGTTGGCTGTACCTAATTCTTATCTCATAGTTGGTGTTTGTAATAGTTCATTAACACTAAAGATGAAAGGCAGAACAGTAATGGATGAGAAGGAGAGATATGAAGCTGTTAGACATTGTCGTTATGTAGATGAATTAGTTACTGATGCTCCATGGACTCTTACTAATGAATTTCTGGAGGAACATAAAATAGACTTTGTTGCCCATGACGATATTCCTTATGCTGCTGCTGGTGCTGATGATGTTTATACTATGATCAAACAGAGAGGCATGTTTTTAGCCACAGAAAGAACAGAGGGAATATCTACAACAGATATTATTGCTCGTATTATCAAAGATTATGATATGTATGTAAGAAGAAATCTGAGTCGTGGGTATAGTGCCAAAGAACTCAATGTCAGCTACATGAGGGAGAAAAAAATCTTATTGGCTGAAAAATACAACACTATGAAAGACAAGGGAAAAGAATTTATGGACAGATGGGAAGATAAGTCTAAAGAATTTATTGGAAACTTCCTGGAATTATTTGGAAAAGATGGCAGAATAAGTTCCTGGATAGCTGAGGGCACAGACAAAATAAAACAGGCCATTTCTCCACCTGCCAGTCCTGTTCCTGGGGCAAGTGATGAGGATGAAGAAGAAGATGATGATGAAGATGAGGATGAAGAATACACAGATGCTTCATCACCCCCATTAACTAGTCCCCCCTCTAAACGAGGAAGAAACATATCTCCTGAGGTTGGTGCAACAAGTGCAGATTGGGATGACCATATAGTTGAAGAATTCATATAACAGCATTTTAAAAGATGTGTTTATTTGTTTTAAAGACATGTTTACTTTTTAAGAGAAATTTAGAATGTGTTTAGTATTTATGGGAAATGTAATTCGTTTATCATTAATATGAATTGCATATGTTTAGTATTTAAAAAGTATTAAGTATGGAAAAGGCTTGTGTTAGAAAAAGCTAGTGTTAGAGAAGTCTCATGTTAGAAAAGGCTAGGTCATTCTTTCTTAGAGGTACGGTTACTGTTGATTGCTTTTTGTCTTTCAAATCATCTGGTAAGGTATTGTTTCCACCTGTGATAACAATGGGTTGGTTGATCTTTAATCAGATCTATAAACCAATCAGATTTTTTGTATCATATTGATAAACCAATCAGATTTATATTATATATAGTCTATGGATATTGGTGCAGTATGAATGAAGGTTATTTGTGGTTTTATATACATTTGTATTAATATACAGTGCTGTCTGGTTATACTGCCATCTTCTGGACCAGACAATTTTTTGGTGGTAAGCGAGGGTGGCAGTCTTACAAATGAAGAATGTGGAAATCAGATCACAAATTTGATAGTGGTATTCAAGTTCGGTGATAAAATTAAGGGTGATATGGCCAGGGAGCACTGTATAGTTACTGTGACATAGTGAACTTTAAATGAATGTATAGATGTCATTCTATTTTAATGGGGAGTGTTTCTCTCTTAAGTGTAAACCTGATCTGAAATTACAAAATATGTATGTTTATTTATTTTTTGTAATTTAATTTTGAAATCCAATTCAGTAGTTTTATGCAATGTGTATAATAGATCAGGAAAAAAATGTAATTCTATTAATAGATTTTGTTGGTTATTTATAGCGATCTCATAATTGTTTTATTGAACAGCATGTCACCTATTCTTGCTAAATGACACTTATCAATATTAAAAACACATTTCACCACACCATGACACTTTCTGTTGGTGAATGACACATACCAATACATTTTGTACCTAAATTACAAATTTAACCACATCATGACACCTACTCTTGATGACACATAAATACCGCATGACCCACATCAATACAGTATGACACTTAACATTGTTGAATGACACACATGCTGATACCAAACGACACAAAGCAAGGAGACATGACACCTAGGATTGTTGAATGACACACACAAATACAGCCTAAGAACAAGCAAAGTAGAATGATAAGTAGCTATGCAGCATGTCCCATATCAATACTGAATGACGCCAGCCAATGCTGAACAACCAAATGTCAAATTTACCAATATTTTTTTCATATTGAAAAGCTTTCACTTGTATGTAGTGGTTTCTGTTTTGATATGTATATTATTATCAATTGGAGTAGATATGTTTATGAATGATGATAATGACCAATTGCCAAATCATAAGTTTTTTTTACTTTTATCTGTATTAAGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01467	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004821	Domain	Cytidyltransferase-like domain	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR041723	Domain	CTP:phosphocholine cytidylyltransferase domain	Interproscan
IPR045049	Family	Choline-phosphate cytidylyltransferase Pcy1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10739	CYTIDYLYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004105	Molecular Function	choline-phosphate cytidylyltransferase activity	Interproscan
GO:0006657	Biological Process	CDP-choline pathway	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0031210	Molecular Function	phosphatidylcholine binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00968	PCYT1; choline-phosphate cytidylyltransferase	EC:2.7.7.15	Glycerophospholipid metabolism	ko00564	PMID: 28812709
			Phosphonate and phosphinate metabolism	ko00440	PMID: 28812709
			Choline metabolism in cancer	ko05231	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_24074-0.11 global RNA-seq network