| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_24012-4.8 | SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN | Bpl_scaf_24012 | 387978 | 413658 | + |
| CDS | |||||
| Bpl_scaf_24012-4.8 | |||||
| Transcript |
| Bpl_scaf_24012-4.8 |
| Protein |
| Bpl_scaf_24012-4.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01480 | PWI | PWI domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002483 | Domain | PWI domain | Interproscan |
| IPR036483 | Homologous_superfamily | PWI domain superfamily | Interproscan |
| IPR052225 | Family | Serine/arginine repetitive matrix | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23148 | SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0048024 | Biological Process | regulation of mRNA splicing, via spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13171 | SRRM1, SRM160; serine/arginine repetitive matrix protein 1 | - | RNA transport | ko03013 | PMID: 28812709 |
| mRNA surveillance pathway | ko03015 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_24012-4.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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