| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_23987-4.26 | MATRIX PROTEIN, PUTATIVE-RELATED | Bpl_scaf_23987 | 569791 | 582562 | + |
| CDS | |||||
| Bpl_scaf_23987-4.26 | |||||
| Transcript |
| Bpl_scaf_23987-4.26 |
| Protein |
| Bpl_scaf_23987-4.26 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02210 | Laminin_G_2 | Laminin G domain | Domain | Interproscan |
| PF16184 | Cadherin_3 | Cadherin-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR039005 | Repeat | CSPG repeat | Interproscan |
| IPR051561 | Family | FRAS1-related extracellular matrix | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45739 | MATRIX PROTEIN, PUTATIVE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0009653 | Biological Process | anatomical structure morphogenesis | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K08115 | CSPG4; chondroitin sulfate proteoglycan 4 | - | Proteoglycans | ko00535 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_23987-4.26 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
