| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_2348-1.23 | RAB GTPASE-BINDING EFFECTOR PROTEIN | Bpl_scaf_2348 | 85997 | 94617 | - |
| CDS | |||||
| Bpl_scaf_2348-1.23 | |||||
| Transcript |
| Bpl_scaf_2348-1.23 |
| Protein |
| Bpl_scaf_2348-1.23 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01363 | FYVE | FYVE zinc finger | Domain | Interproscan |
| PF09311 | Rab5-bind | Rabaptin-like protein | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000306 | Domain | FYVE zinc finger | Interproscan |
| IPR003914 | Family | Rabaptin | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR015390 | Domain | Rabaptin, GTPase-Rab5 binding domain | Interproscan |
| IPR017455 | Domain | Zinc finger, FYVE-related | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31179 | RAB GTPASE-BINDING EFFECTOR PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005096 | Molecular Function | GTPase activator activity | Interproscan |
| GO:0006897 | Biological Process | endocytosis | Interproscan |
| GO:0043231 | Cellular Component | intracellular membrane-bounded organelle | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12480 | RABEP1; Rab GTPase-binding effector protein 1 | - | Endocytosis | ko04144 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_2348-1.23 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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