Gene detail

Detailed information of Bpl_scaf_23288-3.2 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_23288-3.2	DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN	Bpl_scaf_23288	292169	296695	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_23288-3.2

ATGGCAGATTTCAAATTCAAAAATCGACTTGCCATTGATCAGAAAGTCACTGAAATAGGATTAAAGACTAATGCACCCTTACCATTCAAAGAATTGCATTCTGATGATCCGCTTCATTTGGATCCAGTCAAATTTACTGACAAACTTTTCAACAGTGAAAGACATACTTTTACATGCTTAAAAGCCATAATTGGTATAGTTTGCGGACTATTTTGTGGAGGAATATTATTTCTCTTACTGGTGTACAGTTTTAGTTACGCGTATGATTTAGCCGGATATATCGCCATTGGTTGCACAGTTCTGTCTTGCATTGCCTTAGCATCCTCCGTTCATGCACGATGCATCGGGGTCCTGATGATTCCAAGTCTGTTCACCGGACGGGGTAGGGTTGCAATACTGGCAATCATATTTGGATTGCTACTATCTCGTCCAGTCAAAAACATTTCGGAAAATGCATCGGAAGTGTCGCGCAGCATGGCGTGCAGCACAGAACTTTTCCATAACCAATCGTTATCCTTACGACAACAATTACAAATACCGATAGATCAGATCAAAGAAGCACTAGGAGACCAAGCTGAAGACATTAAAAAGCTTGGCAGAGCTATAGAGTCTGCAGTGCAGCCATTGTACAATGCTATAAATGCAGTAAAAAATGGAGTTCAGCTAGTTAGTGGTGCTTTGGATACAGCTTCACAGGAATGTAACCGAGTTCTTGGCGGTGTATATTCGGATTGTGTAAGGGAAATAACTTCAGCCTACAGATCTTGTACTAAGACCCTCAACGATGTCAAAAAGTATGTACCAGGTCTAGATCTGACGGCCATTTGCAAAATTTTGGACGTTGAAGAGGTTTGTGTTGTTGTAAAAGCGAATGTCTTATGTTCTCCGGTTAATGTTTTGGATGACGCAGCAGAGAAACTAGCTGAATCTATGGTAAAACTTGTCGATGGAATAAATAAATGGTTTCAATTTGACATTGTCAGCAAAGCTGCATTTGACAATGTCTACAACGCCTCTAAAACCACCAAAGAACTGATCGCGGAGGTTGAGGCTGCTCTAACGGAAAGGAAAGTTACAATGACATATGTCTTTGATATACTGAATAAACTCCTAGCTTTGTCTCTCCTGTTAATTCTAACACAGTCGTTTTTCTATTTGAAAAATTATCTCGCAAAGGACGAATTTGACAATATTTACATTACCACAAAATTTAAACAAACGGAAGAAGAAAATAGAAATAACGGAAAAGAAGTTGTTCTTCCTCTTCAAAAGAAAGAAAAGAAATTGTACATCGATAGCAACTCGCCGAAAATGACAGCGAAGGAGAGAAAACAAAGCATACTCGGAATCGCTCAAATCTTCTTGCACATGCTCCTAAGTGCACTTGTCATCTTCCTTAATTACGTACTTTACTATGTGTTGTATCTAGTCAACAGATATGGACACGTTGACGTTGAAATAACGGGAGAAAGTAAGATTAACCTTCAAGTAACTGGAGGTCAAATGGCAAATTTTATTAATACTTTTCTCAACAATATCAACATCGAGAACACTTATGAAGCAAATTACAATACAACAATATGTCTGCCGAATCCCACTGCACCTGACGCCACAGACATTCCCGTACTTTTAGGTGCCTATGTGGCTGCTCTCATACTGGTCTTCCTACAAGCTTATGGAGCAAGATTCAACCGTAAGATATGTGCTTTTTACTACCAAGAGCAAGAAGAAGTTCGCATAATGTTTCTGAAGAAGAAAATCTTGTACAACAGGAAAAAAAGGAGAACATTTATGAGGCAACATGTTAAATCAATGACTCAGCAGAAATTAACCGAGGAGAAGATGTCTTTTAAACATATGCTTGCGGCCGCCTGTCCGTGCTTCAAATCTTCCTTAGTACAACCTCAACAAGGTTTCTGTATGAATTGTGGAGGCTATGCTAGTGCTAGTCGTAAACTGGAAGCATGTAAAAATGCTAGCTGTGAGGCTGTCTACTGTACGGAATGTTTCAACGAATTTAAACAAATATGTCCCGTTTGTAGAAAGTAA

Transcript

Bpl_scaf_23288-3.2

CTTAAACAGGTAAAGAGGGCTTTCAGTTACCGTAAATGGCAGATTTCAAATTCAAAAATCGACTTGCCATTGATCAGAAAGTCACTGAAATAGGATTAAAGACTAATGCACCCTTACCATTCAAAGAATTGCATTCTGATGATCCGCTTCATTTGGATCCAGTCAAATTTACTGACAAACTTTTCAACAGTGAAAGACATACTTTTACATGCTTAAAAGCCATAATTGGTATAGTTTGCGGACTATTTTGTGGAGGAATATTATTTCTCTTACTGGTGTACAGTTTTAGTTACGCGTATGATTTAGCCGGATATATCGCCATTGGTTGCACAGTTCTGTCTTGCATTGCCTTAGCATCCTCCGTTCATGCACGATGCATCGGGGTCCTGATGATTCCAAGTCTGTTCACCGGACGGGGTAGGGTTGCAATACTGGCAATCATATTTGGATTGCTACTATCTCGTCCAGTCAAAAACATTTCGGAAAATGCATCGGAAGTGTCGCGCAGCATGGCGTGCAGCACAGAACTTTTCCATAACCAATCGTTATCCTTACGACAACAATTACAAATACCGATAGATCAGATCAAAGAAGCACTAGGAGACCAAGCTGAAGACATTAAAAAGCTTGGCAGAGCTATAGAGTCTGCAGTGCAGCCATTGTACAATGCTATAAATGCAGTAAAAAATGGAGTTCAGCTAGTTAGTGGTGCTTTGGATACAGCTTCACAGGAATGTAACCGAGTTCTTGGCGGTGTATATTCGGATTGTGTAAGGGAAATAACTTCAGCCTACAGATCTTGTACTAAGACCCTCAACGATGTCAAAAAGTATGTACCAGGTCTAGATCTGACGGCCATTTGCAAAATTTTGGACGTTGAAGAGGTTTGTGTTGTTGTAAAAGCGAATGTCTTATGTTCTCCGGTTAATGTTTTGGATGACGCAGCAGAGAAACTAGCTGAATCTATGGTAAAACTTGTCGATGGAATAAATAAATGGTTTCAATTTGACATTGTCAGCAAAGCTGCATTTGACAATGTCTACAACGCCTCTAAAACCACCAAAGAACTGATCGCGGAGGTTGAGGCTGCTCTAACGGAAAGGAAAGTTACAATGACATATGTCTTTGATATACTGAATAAACTCCTAGCTTTGTCTCTCCTGTTAATTCTAACACAGTCGTTTTTCTATTTGAAAAATTATCTCGCAAAGGACGAATTTGACAATATTTACATTACCACAAAATTTAAACAAACGGAAGAAGAAAATAGAAATAACGGAAAAGAAGTTGTTCTTCCTCTTCAAAAGAAAGAAAAGAAATTGTACATCGATAGCAACTCGCCGAAAATGACAGCGAAGGAGAGAAAACAAAGCATACTCGGAATCGCTCAAATCTTCTTGCACATGCTCCTAAGTGCACTTGTCATCTTCCTTAATTACGTACTTTACTATGTGTTGTATCTAGTCAACAGATATGGACACGTTGACGTTGAAATAACGGGAGAAAGTAAGATTAACCTTCAAGTAACTGGAGGTCAAATGGCAAATTTTATTAATACTTTTCTCAACAATATCAACATCGAGAACACTTATGAAGCAAATTACAATACAACAATATGTCTGCCGAATCCCACTGCACCTGACGCCACAGACATTCCCGTACTTTTAGGTGCCTATGTGGCTGCTCTCATACTGGTCTTCCTACAAGCTTATGGAGCAAGATTCAACCGTAAGATATGTGCTTTTTACTACCAAGAGCAAGAAGAAGTTCGCATAATGTTTCTGAAGAAGAAAATCTTGTACAACAGGAAAAAAAGGAGAACATTTATGAGGCAACATGTTAAATCAATGACTCAGCAGAAATTAACCGAGGAGAAGATGTCTTTTAAACATATGCTTGCGGCCGCCTGTCCGTGCTTCAAATCTTCCTTAGTACAACCTCAACAAGGTTTCTGTATGAATTGTGGAGGCTATGCTAGTGCTAGTCGTAAACTGGAAGCATGTAAAAATGCTAGCTGTGAGGCTGTCTACTGTACGGAATGTTTCAACGAATTTAAACAAATATGTCCCGTTTGTAGAAAGTAAAGACCTGAAAGTGTGTACATGTATTTTTTCTCAAGAAAACAGACATTTCCTGCATATTACAGTCACACTTATTTTTAGCATATACAGTCAAACCTTCTTTAGTGGCCACCTCTATTAAGCAATAACTTGTACTGGATTAACTTAATTTTAATTTCCCTTTACAGTGCATTTCATATTAATTAAACCTGTATTTAGTGACCACCTGTATTATGTGAGCATATTTCAATCATTTGACTGTAAATGTATATAAAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07782	DC_STAMP	DC-STAMP-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR012858	Domain	Dendritic cell-specific transmembrane protein-like	Interproscan
IPR051856	Family	Cell Surface Receptor and E3 Ligase Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21041	DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_23288-3.2 global RNA-seq network