| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_23165-2.2 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 | Bpl_scaf_23165 | 189013 | 232128 | + |
| CDS | |||||
| Bpl_scaf_23165-2.2 | |||||
| Transcript |
| Bpl_scaf_23165-2.2 |
| Protein |
| Bpl_scaf_23165-2.2 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18044 | zf-CCCH_4 | CCCH-type zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR041367 | Domain | E3 ligase, CCCH-type zinc finger | Interproscan |
| IPR052647 | Family | Zinc finger CCCH-type domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46582 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0071011 | Cellular Component | precatalytic spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13092 | ZC3H18; nuclear protein NHN1 | - | Spliceosome | ko03041 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_23165-2.2 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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