| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_22762-6.10 | PROTEIN CASC3 | Bpl_scaf_22762 | 756504 | 763001 | + |
| CDS | |||||
| Bpl_scaf_22762-6.10 | |||||
| Transcript |
| Bpl_scaf_22762-6.10 |
| Protein |
| Bpl_scaf_22762-6.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09405 | Btz | CASC3/Barentsz eIF4AIII binding | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018545 | Domain | Btz domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13434 | PROTEIN CASC3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0006397 | Biological Process | mRNA processing | Interproscan |
| GO:0035145 | Cellular Component | exon-exon junction complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14323 | CASC3, MLN51; protein CASC3 | - | RNA transport | ko03013 | PMID: 28812709 |
| mRNA surveillance pathway | ko03015 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_22762-6.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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