Gene detail

Detailed information of Bpl_scaf_22220-2.16 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_22220-2.16	NUCLEAR FUSION PROTEIN FUS2	Bpl_scaf_22220	307681	331789	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_22220-2.16

CAGAAATATAAAAAAAGCAAGGAGGATTTAGAGTTAACACAATCACACGAAGGAAATGATGCAGAAATCTATGACAATATTGAGTTTTACACAGCAAACATAGAAGGACTGACACAAGAATTAGAAACACTCAAAGAAAGTCTAAATAAAGTCCTTCCTAGTTCTGAGTTAGATGCTGTAGCTAAACAAATGGAGGAGGAAGAGAAAAAGAAAGAAGAATTAAAAAGACAGGAGGAAGACAGGGAGAGGGCAGAGGAAGCCAGGCTAAAGAGAAGAGATAAGAGAGAAAGGGTTATTGATGAACTGATACAGACAGAGAGAGATTATCTTCATGGACTACATCTGTGTATTGAGACTTTTATAAGTCCTACGGGGGTAAAGAATGCTGGGGTAGACATTGATGCTGTGTTTGGTAATATAGAAGATATAGCTGATGTGTCACAGAGGTTACTCACTCTATTAGAGAATGCTGTCAATGGTCAAGATTTTGAGGATCAGCTCCTGGGTCCATGTTTTACCCAGCTGTGTGATGACATGAAGAATGCCTACGCCCCTTACTGTAGAAACCATGATGAAGTCATAGCAATATTAGAAAAGTATAGAGAAGACCAGTCAATCAAGCAGTATTTTGACGAGATGTTGAATAAATTACGGGAGAAAATCGTAGTGTTTGACCTGGAAGCTTTACTGATAAAACCAGTACAGAGGATATTAAAATACCCATTATTACTGAATGAACTTATAAAATCAACAGAGGACAGTCATAAAGATAAAGTAGAGATTCTGAACGGTATAAATGCCATGACTGATGTGGCTACAGCTATCAATGAGTACAAACGTAGGAAAGATCTAGTTTATAAATACAAAAGAGAAACAGACCAATCACTAGGAGACATGTTGGCAAAACTTAATTTCCATTCATTGAAGAAGAAAGGAAATAGATTTAAAGGGAGATTATCCACTAATCTTGGAATTGCACCACAGGAGTCTTACAGTTGCCATGAAGATTTGGTGATGGATTTAGTAGATATTTATGATGAAAAGACATGTCCAGAAGTGCAAAAATATCAGAAGTTATACCATGTTATACAGCACCAATTCCTTCCTAAATTTGTAAGTGACCTTGTCGTAGTTCCTCTCAGTAAACTGATTGTATTGTTTAATGGTCCTAATAAAGTTATACAGAAAAGATTTGATAAACTGTTAGACTTTGATTCCATGCAGAGGAAAGAAGAAAAGGGTTCAGAGAAATCTCTTCAGGCAGCCAAGAGTAATTATGAAGCTTTAAATGCCCAACTGTTGGATGAACTACCAAAGATGTACAGCTTGTCATTTAAACTGCTAAAGGATTGTATAAAAACCTTTGTCCAAGCTCAGAAGAAGTTTTATTCTAGTGTAATTCACTGTATGACTGAGACTTTTGATATGTCGTTATTGTTACAGTCAGAAGGAATAGTCACAGACAATTTTAATATCCACTATGTCACAATAATAGACAAAATATCTGCCCTACGTATTATACCAAAGGGTTTTAATCCTAAAATGGAAGCTTTAGCTAAACCAGTAACAGGGGAACCAGTTGACAAAAAATCAAAACGGATGTCCGTGCCCATGGAAACGACTCCATTGCCTGTGTCCTCTTCTGTACAAAGTGATAGCCAGCGAGTATTTGTGCAACAGAAATATCCCCCAGATAAATTGTACCGAGTGACCACACCCTACGCTGCTGCTGATTTGATGGACATCTCTGTGGCAGAGGGGGTCTGTGTGGGGCTCATTGTAGATAAAGATCCCATGGGAAATAAAAACAGATGGTTTGTTGATGATGGTGCTATTCAAGGATTTGTTCCAAAAACAGTATTAAAACTTTATAATGAAGTAACTACAGGCTCTGCTCAAAGTATATACCCTTCAGTGGATAAAACTGTTTTACCGTCTGATGTTACAAATAATGTGATTGGTGAAACGTCTCCAATGTCTTCCCCACTTATGGCATTTACCGATTCTTCCAATGATAAAATATCAACCAATCAAATTGAAGAGGAAGAGAATGAATTAGATTTTGCTTTAGATGAAGACATGAGTCCAAGTATTTCATCAGAAGAGCCATATATAGCAGTTAAACAGTTTTACTACGCATTGTATGGATTTACAGCCAGGAACAACAACGAAATAACATTATTTGATGGTCAGGTCGTAACTGTGTTAAAAAAACACGACCAAGAAAATAACACTGATTGGTGGTTGGTTGATGCTGATGGGGTCAAAGGTTATGCACCAGCTAATTATCTTCAGCCAATGGGATGA

Transcript

Bpl_scaf_22220-2.16

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621	RhoGEF	RhoGEF domain	Domain	Interproscan
PF03114	BAR	BAR domain	Domain	Interproscan
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000219	Domain	Dbl homology (DH) domain	Interproscan
IPR001331	Conserved_site	Guanine-nucleotide dissociation stimulator, CDC24, conserved site	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR004148	Domain	BAR domain	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR035899	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR051492	Family	Dynamin-binding and Rho GEF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22834	NUCLEAR FUSION PROTEIN FUS2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_22220-2.16 global RNA-seq network