Detailed information of Bpl_scaf_21765-0.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_21765-0.3RRNA METHYLTRANSFERASE 1, MITOCHONDRIALBpl_scaf_217652051541628+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00588SpoU_methylaseSpoU rRNA Methylase familyFamilyInterproscan
PF08032SpoU_sub_bindRNA 2'-O ribose methyltransferase substrate bindingDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001537DomaintRNA/rRNA methyltransferase, SpoU typeInterproscan
IPR013123DomainRNA 2-O ribose methyltransferase, substrate bindingInterproscan
IPR029026Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR029028Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR029064Homologous_superfamilyRibosomal protein eL30-like superfamilyInterproscan
IPR047182FamilyrRNA methyltransferase 1, mitochondrialInterproscan
IPR047261DomainrRNA methyltransferase 1, methyltransferase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46103RRNA METHYLTRANSFERASE 1, MITOCHONDRIALInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000154Biological ProcessrRNA modificationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0016435Molecular FunctionrRNA (guanine) methyltransferase activityInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15507MRM1, PET56; 21S rRNA (GM2251-2'-O)-methyltransferaseEC:2.1.1.-
Ribosome biogenesisko03009PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_21765-0.3 global RNA-seq network
TOP