Gene detail

Detailed information of Bpl_scaf_21626-3.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_21626-3.12	BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE	Bpl_scaf_21626	290041	314245	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_21626-3.12

AATGACCTTTCAGTGTAGAAAATCAGTCATCCAGTGATATGACGTGACTAGATATACACATTTATATAGAACAAACCATCTGTTATACAGATAGTTGAGAGAAAATACTTAAGTAAACTTATAGAGTGGATTGCCACATCATCATATCATAGAAGTTTTTATTTAAAAGATCAATATTGAGATCTGTTTATTGGATGAGCTCCATTAGATTATCACACTATGTCAGAGAAACAGCTGATTATTCCTGCAGTGAACAAGGCGACCAATGTCAAATTCCAGGACAACTTAGTTAGTCGAGACAAGCGAGGACAGGTGCTGGGAAAAAGTAACCACTTTTTGGGATGTACCGTATGGTTGACTGGATTATCTGGAGCTGGGAAGACAACTCTGTCGTTCGCTCTAGAGAATTATTTGGTCAGCCAAGGAATTCCATCATACAGTTTAGATGGAGACAATGTCAGGACTGGTTTGAACAAGAACCTTGGATTTTCACAGGAGGACCGTGAAGAGAATATCAGACGTATTTCTGAAGTAGCCAAGTTATTTGCTGATGGTGGAATTGTATGCTTGACTTCCTTCATCAGTCCATATGAAAAGGACAGAGCTAGTGCTAGAGAACTGCATGAGAAAGCAGGTTTAAAGTTTGTAGAGGTGTTTGTAGATACACCATTAGAAATCTGTGAAGAAAGAGATGTTAAGGGACTTTACAAGAAAGCCAGAGCAGGAGAAATTAAAGGATTCACTGGAGTGGATTCAGCTTATGAGCCTCCATCAATGCCTGATGTGAGAGTCAAGGCAGGGGAATTAACTCCAGATGAGTGTATTCAACAAATTGTTCAATATCTAATGGAACTGGGAGTAGTTCCCTCTACTGCTGTTAGAAATGTTAAGGAATTGTTTGTACCAGAAAACAAACTTGAAGATGCCAAAGTTGAGGCTGAAGCTCTACCATGCATGGAAATTAGTAAGCTTGATACACAATGGGTACAGGTGTTGGCAGAAGGATGGGCAACGCCCCTCAATGGATTTATGAGGGAGAGAGAATACTTACAATGTCAACATTTTGGATGTCTGTTAGATGGAGGAGTAACGAATCAGTCCATACCAATTGTTCTACCAGTTTGTACAGAAGACAAAGAGAGACTGAAAGACAGTGCAGCATTTACATTAAAATATGAGGGCAAATGTATGGCAATTCTACGCAATCCAGAATTCTATCCACATAATAAGGAGGAGAGGTGTTGTAGGCAGTTTGGAACCAGTAATGCAGGTCATCCTTATGTCAAGATGATATATGAGAGTGGTGATTGGTTAGTTGGAGGTGATTTGTCGGTTTTAGAGCGGATTAAATGGAATGATGGACTAGACGATTATCGGTTAACACCAATGGAGTTAAGGGCAGAGTTCAGAAGACTGAAGGCAGATGCAGTGTTTGCATTCCAGCTACGTAATCCTATACACAATGGTCATGCATTACTTATGGCAGATACTAAGAGAAGACTTATAGAGAAAGGATACAAAAAACCAGTTCTACTTTTACATCCATTAGGTGGTTGGACCAAAGATGATGATGTACCTTTACCTAATCGTATAGAACAACACAAAGCTATTCTAGAAGAAGGTGTTTTAGATCCAGATTCCACAGTTCTAGCCATATTTCCATCACCCATGATGTATGCAGGTCCAACAGAGGTACAGTGGCATGCAAAAGCTCGCATGTCAACAGGAGCAAACTTCTACATAGTGGGTCGAGATCCAGCAGGAATGCCCCACCCTGATGGAGGGAAAGATCTATTTGACCACACACATGGAGCTAAGGTTCTCACAATGGCACCAGGTCTCACACAGTTAGAAATCGTTCCATTCAGAGTGGCAGCTTATAATGTCAAACTCAAGTGTATGGACTTTTATAATCCAGAAAAGAAAGAGGATTATGAGTTTATATCAGGAACAAAGATGAGAAAGCTAGCGAGGGAGGGCCAATACCCACCCGACGGGTTCATGTCTCCAAAAGCTTGGAAGGTCCTTCAAGCTTACTACCAGTCATTAGCAAAACAATAAAATGTTATTCTTGGAAATAGAACTTTTAAAAAATATGATCGAGGGTACAGAAACGAGGGACCATGCATTTGATTTAATATATTCGGTTGTTAAATTTTCAAATGGTAGACAACTTTTTTTTAGTAAAACAGTTTGACCAAAATATTTGTTGGTTGTGTCAAGTTTTAAATAAAATTTCAGGATTATATAAAATATCTATTATTTATGGAAACTCAGAAAATACAAATCAAAACCATTAGAGATGTGATTTGAAGTTGTGTACTTTCAATCTCCAGTTTACAGACAATTTCTCTTCAAGACGATCAGTTGAACATTTTATGTTGTATCTTTTACACTAGAAGAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01583	APS_kinase	Adenylylsulphate kinase	Domain	Interproscan
PF01747	ATP-sulfurylase	ATP-sulfurylase	Domain	Interproscan
PF14306	PUA_2	PUA-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002650	Family	Sulphate adenylyltransferase	Interproscan
IPR002891	Family	Adenylyl-sulfate kinase	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR015947	Homologous_superfamily	PUA-like superfamily	Interproscan
IPR024951	Domain	Sulphate adenylyltransferase catalytic domain	Interproscan
IPR025980	Domain	ATP-sulfurylase PUA-like domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11055	BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000103	Biological Process	sulfate assimilation	Interproscan
GO:0004020	Molecular Function	adenylylsulfate kinase activity	Interproscan
GO:0004781	Molecular Function	sulfate adenylyltransferase (ATP) activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0050428	Biological Process	3'-phosphoadenosine 5'-phosphosulfate biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13811	PAPSS; 3'-phosphoadenosine 5'-phosphosulfate synthase	EC:2.7.7.4 EC:2.7.1.25	Sulfur metabolism	ko00920	PMID: 28812709
			Purine metabolism	ko00230	PMID: 28812709
			Selenocompound metabolism	ko00450	PMID: 28812709
			Monobactam biosynthesis	ko00261	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_21626-3.12 global RNA-seq network