Detailed information of Bpl_scaf_21376-1.18 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_21376-1.18KU AUTOANTIGEN DNA HELICASEBpl_scaf_21376214238251367+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02735KuKu70/Ku80 beta-barrel domainDomainInterproscan
PF03730Ku_CKu70/Ku80 C-terminal armFamilyInterproscan
PF08785Ku_PK_bindKu C terminal domain likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005160DomainKu70/Ku80 C-terminal armInterproscan
IPR006164DomainKu70/Ku80 beta-barrel domainInterproscan
IPR014893DomainKu, C-terminalInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR024193FamilyKu80Interproscan
IPR036494Homologous_superfamilyKu, C-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12604KU AUTOANTIGEN DNA HELICASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0043564Cellular ComponentKu70:Ku80 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10885XRCC5, KU80, G22P2; ATP-dependent DNA helicase 2 subunit 2-Non-homologous end-joining ko03450PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_21376-1.18 global RNA-seq network
TOP