Detailed information of Bpl_scaf_21317-0.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_21317-0.6CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7Bpl_scaf_213175256461041+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03657UPF0113UPF0113 PUA domainDomainInterproscan
PF17833UPF0113_NUPF0113 Pre-PUA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002478DomainPUA domainInterproscan
IPR005155DomainUPF0113, PUA domainInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR016686FamilyRibosome biogenesis factor, NIP7Interproscan
IPR036974Homologous_superfamilyPUA domain superfamilyInterproscan
IPR040598Domain60S ribosome subunit biogenesis protein NIP7, pre-PUA domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23415CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042255Biological Processribosome assemblyInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07565NIP7; 60S ribosome subunit biogenesis protein NIP7-Ribosome biogenesisko03009PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_21317-0.6 global RNA-seq network
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