Detailed information of Bpl_scaf_21302-0.28 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_21302-0.28GLUTAMINE-TRNA LIGASEBpl_scaf_213026122574102-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00749tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan
PF04557tRNA_synt_1c_R2Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 FamilyInterproscan
PF04558tRNA_synt_1c_R1Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007638DomainGlutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2Interproscan
IPR007639DomainGlutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR020058DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR042559Homologous_superfamilyGlutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 2Interproscan
IPR050132FamilyGlutamine/Glutamate--tRNA LigaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43097GLUTAMINE-TRNA LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004819Molecular Functionglutamine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006425Biological Processglutaminyl-tRNA aminoacylationInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01886QARS, glnS; glutaminyl-tRNA synthetaseEC:6.1.1.18
Aminoacyl-tRNA biosynthesis ko00970PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_21302-0.28 global RNA-seq network
TOP