Gene detail

Detailed information of Bpl_scaf_21241-0.6 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_21241-0.6	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER	Bpl_scaf_21241	108858	125824	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_21241-0.6

GAAGAAAAAGAAAACACATTGAACTATTTTGCGGATTTGGCTTATGTACTGGCCTGATCACTATACAGTGCTACGTCACACACTGATGGGATAGCCCTTCGTTCGTGATTCCCTCCAAATGTTCACAGTTGGAGTTGCATCAGGCTGATATAAATATTGCAAAATGTCAACATGGTTCCCAGAGAGACCAAAGACATGGTATCATCGACTTTGTACCAAGATCATCAAATCAGGCCCAATACCTAAACATGTAGCAGTAATAATGGATGGCAACAGAAGATTTGCTATGAAAAATAGCATGGAAAGGGCAGAAGGTCACCTGAAAGGTTTTGATAAACTAACAGAGGTTCTAGAATGGTGTTTAGACTTAGGTATCAATCAGGTGACAGTCTATGCCTTCAGTATTGAAAACTTTAAAAGATCAAAGGATGAAGTTGATTGTTTAATGGAAATAGCCAGAAAAAAGTTTAAGAGGCTAATGGAAGAAAAAGACAAGATTCAGAAATATGGTGTTTCTGTAAGAGTACTGGGTAATATTAGATTGTTACCGTATGACATACAAGAAATTATAGCTGAAGTTGTTACATTTTCTAAACATAATACAAGGGCTATTTTAAATGTTTGCTTTGCCTACACCTCTAGAGATGAAATGTGTACAGCCATGAAAGAAATAGCAGAGGGTGTTTCATTAGGATTAATAAAAGACAGTGATGTATCTGAAGATTTATTAGAGAAATGTTTATATACAGGAAATTCATCCAATCCTGACCTACTTATCAGAACATCTGGAGAAATTAGATTGAGTGATTTCTTATTGTGGCAGACTGCCTACAGTTGTTTAGCTTTTGTGAGTGTGTTGTGGCCAGAATTCAGTCAGTGGCATTTATATGCCTGTATTCTACACTACCAAAGAAACTATGCAGAAATCCAGAGAGCTAAAGACAGTAATGAAAGTAATAAATTACGACTACAAAGAGAAAGTGATTATCAGATAGTGTCACAACAAATGGACCAATCAGAATCAAGCTCTTTACATACGTTTGTCAAACAATATGCAAATGAGAGAGAAAATAGAGTAAAGAATTTTATACAATATCTCCATAGTAAAAGAGAACAATTCTTTGATGATATTGCAGCTAATAGTAAACAAAATGCATTGTGATAATGATAGATGTTTTAGTCTTTAAAATTTATATTTGTCACTAAAGGTGGGTTTGACTCCTGATCTTGGCAAGGTGTACTTGATACAACATATTGTAATAAAGTTTATAACTTACTAATAGATGGCCAGTAGGTTTCTCATGTTACTCGGGTTTCCTCCATCAATAAAAATAACAGCAACGATAAATACGGAATATTGTTGAAATGAAATGTATGACATTGCAGTATCATGGCTTATCAATATAAAGATGTATAGGAATAAGGGTGAATCTGAAAAGTACATCTCACAGATATTGAATTTACTTCTCTGTGTAAAGTCTTGCATCTTGTAGATCTATACAAAGTTTTATCCACAAGTTTTATTTCAAGTACCTTCATTAGGTCAGGAGTATGATTAAATAGGCATGTCCTCCGGTGTACTATTATATTATTATTTTTTAATGTTAAAAACAATATCTAAACATTCAGTATTGTCTACTTATTGACTGTCTTGAACTCTTTTATTAGCTTGTTGAAGGTTAAACAATTTTGGTTATTATTCCTCTGAAGGGAGATAACTCTTGGGGGGTGATGTAAAAACTAAACTGAGCGAGCGAGTGATTGTTGTTTAATGCCAACTCCGCAACTTTTCAGCTACATTGTATATCATGGCGAGAACAAGTTACACATGTAATGAGTGAAGGTCAATACATCTAGTATGACTTTATTGGAAGTCATATTTGTCATAGCAAAATTACCACCAACAACTGAGCATACAATATAGGCTATACAGAGTTATTTAATGTGTATTAATCCTCTAGTACTCAGTTAATATGATGAATTGTCAACATTTTGGTGCCTAAAAAATCACCCAACTTTATAAAAAGCTTATGGTTTGGTCTGAATGTGTTAACTATAAGAAATACTACAGACCATAAAATTATGTTCCCAAGGAAGGTTGCAACTTAAGTCACATTCCAGCAGCATTCTAGTCACAAGAAAATTCTAAATTTTCTCTCCAGTGATGTTGCTTAAATTTTTAGTTTTTTGTGTTTTGTTTGTCTTCGTCCTATGTCTTGTGTACCAAATGTTGCTAGTGTCTCTGGATAGTCCATTCTTAATAGCATGGTCACTTTTCTCCAACCTGTAAAAAGTATTTTATGTTTGGAGAACTTTTCAACCCATTGGAAGATTCAGATTTTAAGAAGGGGGTCCAATAAACTTTTTCTTGCTAAAGAAAGGGAAGGGCTTGGTTTGGATCAGTTTTATTGATTTCTTATTTAAGGATAATCAGTTTGCAATATGGGTGAGGTTTTCAACTCCTGTGTGAAGACCTCTTAGGAAATATGGACATGCATAAGAAACCTTAGATATACAGGTAGTCCAATGAATTGTTTATGAGGCAGTAGTGAAATTGAACAAAAATAGTTGTATATTACAGGTAATCAGTTATTTTGTAATTTTTATGAGCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01255	Prenyltransf	Putative undecaprenyl diphosphate synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001441	Family	Decaprenyl diphosphate synthase-like	Interproscan
IPR018520	Conserved_site	Di-trans-poly-cis-decaprenylcistransferase-like, conserved site	Interproscan
IPR036424	Homologous_superfamily	Decaprenyl diphosphate synthase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10291	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002094	Molecular Function	polyprenyltransferase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016094	Biological Process	polyprenol biosynthetic process	Interproscan
GO:0016765	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0045547	Molecular Function	dehydrodolichyl diphosphate synthase activity	Interproscan
GO:1904423	Cellular Component	dehydrodolichyl diphosphate synthase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11778	DHDDS, RER2, SRT1; ditrans,polycis-polyprenyl diphosphate synthase	EC:2.5.1.87	Terpenoid backbone biosynthesis	ko00900	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_21241-0.6 global RNA-seq network