Gene detail

Detailed information of Bpl_scaf_21200-0.26 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_21200-0.26	MAX DIMERIZATION, MAD	Bpl_scaf_21200	47530	55940	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_21200-0.26

CCCGAAGTAAACAAACATCGCTTGCCTCAACGTGTAACTTTGACAGAAGGAAATTTTGTAGCCGTTGAGCGCACTATATCTAATGATTGCTTAGTATTTTTTGAAAAGAGATTGCGATTTTGATAATATGTTTAATATAACAACATTACTACAAGCTGCTGAATATTTAGAAAGACGTGAAAGAGAGGCAGAGCATGGCTATGCATCCACAGCTCCTATGCCAGAATATGTGAACAAAAAGAAAATCAAACCAAAGAAATCTCAGGGTAATAGATCTACTCACAATGAGCTAGAGAAAAATAGACGAGCACATTTAAGATCGTCATTAGAGAAGTTAAAAGAATTAGTTCCTGTTGGTGGAGATAACAGTCGCCATACAACTTTAGGACTTTTAACCAATGCCAAAGGCTTTATTAGAAACTTGGAAGATAAAGAAAGAAAATATAATCAGCAAAAAGAACACTTAAAGAGAGAGCACAGATTTTTACAGCGTCGTTTAGAAAGTTTAATGGAAGGCCAGTATAGAGTAAGACAAGAACGCAGTATCAGTGAATGTAGTACAGCAACTAGTTCTACCTCGTCCACGTCAGAATCAGATGAAATTGACATCCTTGGTTATGGCAGTGGTCAAAGTGATACTGATGATCACAGCAGCATCGAAAGTGGCAGCGACGGCTTTACTGGAGCCGCTAAACGTCTAGTTTTAAATTCTTCATCCTTGGATTGCCTGTGAGGGTGACAAAGCCCTGTCATACAGGACAGGATGGATGTATGTTATGATATAAATGATGATCAGATCTGTTAGTACAGACAGTTAAATTTTTATTATTTATTTGATTGTATGAAGATGTGTAAATCTCTTTTTTTGTTAAATTTTGATGTTGTAATGTGGTGACCTGAGAGATTGGAACCAAAATCATATTTATGTAATGGTCAGGGCAGATAACAAAAGATAAACTAATGTTTTTCTTGCCTATTAACTCAATATTTTATTAATCATAGTATTTACCTTTATATGACAACTGGCAATAAGAAAGTGCTTGATTGTGTGCAGACTTACTTTGTTATCTCCCTTGACCATTCTGAAATTTTTGTCTAATGTGCAAAGGGTCATGTGATATGATCTCAAGTTTTGTCTCTCCAAATATTTGGCGAGACATGTCATTATGTACAAGTAAATGGTGCAATAGTATACCAAAACAGCAAACTGGTGTACTTGTGACTGACCCTTACAACCACCTTATCATCTTATGACCTGGTCATCACATGATTTTGAATTGGTATGACTGATAACCACAAGAGGCAGGATAAGGTAAATTGGCAGCAATATTCCCCCTCCAAACAACAAGACAATTCTATACAGTATATCTATAGTATCATTTCTGTAAATATATTTATCTAACTTATTGTTTTAATCTTCCAATTAGTTTGTTTTTATTGTTGAAATTTTTAGCAATATTTCATGTATTTTGAGCATGACCTGGTTAGTGAACTATGACCTAATTTTGCTGGGGTCTACTCCAAGTAACATGTTGATGCTTCAATAGTTTGATGAACAAATTTGGTTTTTATAATTTACAAATACAAATTTAAGCTACAAGCTGTGATATCTTCTCTACTTAAAAGCTATGTATATTAAAATGCTCCACAACAAATTGTAAACAAAAACAAAATGTACAATAAATCTGATTTAGGAAATAAGGCTTGTATATAGTAGTACAATGTAGTGACTGTCGTTCAGTAAGACGTACGTAGGCATTCCAACTCTGGGTTTATCTTGTATTTTCATGTATATGACAAAACTATATAAGGGTAGCTTTTATATTACCCGGTGACAAATTGTTGTTTTATTTGTAATGCATATTTTGTTTGTTATTGAAATCTCTGGAAAAAAGCCAGGTTTGAAATTTATGACTCTAAAACAGCATTGAAAATCAGACTGTATTGTCTACCAAAGAATATTTTTGGTCAAATTTTCTGAGTGAAGATTTTTGGATGTGTAAATTATTAACACCGGTACCTCTAGAACATATGCATAACTTAGATAAGTGAAAATATTGTAATTTTATATGTGTGTACTCGTTGCAAGTTTGTAAGTGCTTAAATAAAAGGATATCATGAAAAACTACACAAAGTGGAAAGCATATATATATGCAAATATGTATATATTTTTTTATTTGATATTTCAAACTAAAAAAGTTGCATTAAATAAGATTCTCAATTTCAAACATTTCAAAGAAAATGATATTTTCAATGTATGCTGTCCCATTCAGGACACTCATTGTTATTTAAATGTATACATTGCTTCAAAATAATGCTGCTGTTTAATTCTTTCATGATATATAAAGCCAGTAATATTGAGAGAATAACAAATAAAAAAAAATTTAATTCCAAAAAATAAAAATTGTATAAAGAGAGTGAAATAAGTAATATCTCTAGTTTAAATATCTCAAGTTTGGAGAATTTAATCTTCATACATGTATATTTGCTGGGCAAGTGAGAGACCAAAAATGATTAACTAGTTAGTCTAGTCTAAAAGAATTTGTGGGTAGTCATGTGTGGTAGAATACCCAAGAAACAGTTTGGTCTAATACATACAAAAGGACAGTGTGATGTAACTTCTCTAGTCGTTCCCAAGAAAATTGATTTTTATCAGTTTACTGGCCATTATTTCTTGGTGAAAAAAAAAGAAATTTGTCTCAAATATTCACAAATAAATTTGGTCTTATAGCTGGATGGATTTCCTGCATTACAAAAATATGAGAAATTTGACAATTTCCATTCCCAGTAAAATACCATATTATATCTTTCTAACGTTGATGTACTGGAAAGAAATAAGTGCTACTAAATTTAAAATTTATAATACTAGAATCTGATTTAAATTACAGCTTTATTTGCTCCTATTTTCTGATATGTTGCAAACTTTACTTGAGATATATCAGAAAAGGGGGGGGGGGCAGTGAACAGATGTAATATTAATTAGATGAATTATAGCTATTGGTATTGTAGTCTGAGTTCAGATAATTATATGTAACATTTACCAGCACAAACCTAAATCTGTGTAGAATATTTGTAGACCTTGTTGAATAACTGACAACAAAAATATTTTGTGAAAAGTATACCTAAGTGGGACTGATAGAAATCCTAGATATGGTATATAAGTGTGTAAGATTGTGTACAACACTACAAATCCATCACATATCCAACATATAAAGGTGACATTTACCTGTGGTAATGCAAATGTAAAAGTATGAATCAAACACTAGAAGTCCCATCTTTTAACATCTATTTTTCACTATATTATGTGTAAATGTGTAACACAGATACCGTATGAATTTTCCATTGTTTTAAGTACTAAATATGTGCATGTGTTAGATTCTGTAGTAATATAAGTGTTATATGTTGGTATAAATGGCAATGTCATCAATTGTTTTATTTTTTCTCATCAGAGAATTAAAAGTCTATTAAATTTTTATTTATAA

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11969	MAX DIMERIZATION, MAD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09114	MXD, MAD; MAX dimerization protein	-	Transcription factors	ko03000	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_21200-0.26 global RNA-seq network