Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Bpl_scaf_21173-2.11 | 30S RIBOSOMAL PROTEIN S1 | Bpl_scaf_21173 | 182016 | 214029 | + |
CDS | |||||
Bpl_scaf_21173-2.11 | |||||
Transcript |
Bpl_scaf_21173-2.11 |
Protein |
Bpl_scaf_21173-2.11 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF09371 | Tex_N | Tex-like protein N-terminal domain | Domain | Interproscan |
PF16921 | Tex_YqgF | Tex protein YqgF-like domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
IPR018974 | Domain | Tex-like protein, N-terminal | Interproscan |
IPR023319 | Homologous_superfamily | Tex-like protein, HTH domain superfamily | Interproscan |
IPR023323 | Homologous_superfamily | Tex-like domain superfamily | Interproscan |
IPR032639 | Domain | Tex protein, YqgF-like domain | Interproscan |
IPR037027 | Homologous_superfamily | YqgF/RNase H-like domain superfamily | Interproscan |
IPR050437 | Family | Bacterial ribosomal protein bS1 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR10724 | 30S RIBOSOMAL PROTEIN S1 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003729 | Molecular Function | mRNA binding | Interproscan |
GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
GO:0006139 | Biological Process | nucleobase-containing compound metabolic process | Interproscan |
GO:0006412 | Biological Process | translation | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for Bpl_scaf_21173-2.11 global RNA-seq network |