Gene detail

Detailed information of Bpl_scaf_20847-5.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_20847-5.8	COPPER AMINE OXIDASE	Bpl_scaf_20847	520546	523101	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_20847-5.8

ATGGAAGAAAGAAAAAAGAAAACATCTTCATTAAAAGTAATTGTATGCGGACAAATAATAGGGATTTTAGTTTTAGCAGCTGGGTTTACAGCTGGCTTATGTGTTGGGATATTTGTATTCCATGGTAACCATGGAGAAAAATCGACAACTGACACCTGTCGATGTCCGGACGGCCATCAATCTATGACTGTTGAAGATGGTCTTAAACTAGAAGGACACACAAATACACAAACTAATACTATTCCGACTGATATGAAAAAAACGATTAAAACAAACAATGATCGGCCCCATTCACATCCAAACAAAGAAAATGCTAATGAAATACCTGAAATGGAAGAATCCGAAATTCAGTTAGTAGAATCTTGTAAAAGATGTGTTTGGAACAATCCTGTACGATCGTCGAATGGTCCAGATTTATTTGCTCCGTTAAGTGCGGACGAAATGATTCTAGTTCATAAAACTTTACTTGATAATGGGATGGTTGATGTAGACCGTGGTCAAGCAATTTCCTTTCAATCTAATTTTGTCGCAACCATGTTTCTACACCCTCCTTTTAAAGCCGCCGCTCTAAAATATTTAGATTTGAAAGGGGAATTTCCAGGACGATATGCCACCGCTGTTGTCATAAGGGGGAACATTGAACAAAAGGATTACATGCAGTATAAAGTTGGCCCTTTGGACGGACATCCAGATGACGTTACAGTGAGACAACTGATGAAAGACGGAGAAGTACCATATGAAAATAGACCCTACGATAATGTTGAGATAGGGGAAATCATTTTGTTTGTTTTGGCGGATTTAAAGAAAATGTCGGATTTACTCAAGCACAGTTTTGACATTAATGATGTGTACCAAGATATAACAGTAATGCCGAATGGACCGTATAATGATGGTTCTGGGCGTATCAGTCGTTTTACACTTGGTTTGAGAGGTTTAGGAAATAAAGAATTCGATTTCTTAAACATTTTACCGTTCACTGGTCGTTTATATCATGGTGGACAAAATGTCTCTGCCTGGTACACATATGATTATTTTTATGTAAACCAGGGTCCATATTCTAATGTAACCAACTTACTCGAGGCATATTTCAACGGAGATTTTGAGTATGTCCATTACCCAGAAGGCTATAAAGAACATATAGTTCAAGCAACAGTCCCAATGAGAAATGTATATCTGCACCCAAGACCTAATTCACAGTTTCCAGGAACTAGTACATATGAACCACATGGTCCCCGGTATACAATCACAGGCCATTCTGTGAATTGGATGGGGTGGTGGTTTACCATTTCTACAAGTCAGCACAGAGGACCCGCAATTTTTGATGTCAGGTTTAGAGGGGAGAGAATTGTTTACGAAAACTCTCTGAACGAGATAGCATTGGTTTATTCCACCGATGGAAATGGACAAGATAACATGGTTTTTCTCGATTCTGTATATGGGTTGGGCGAGTCAAAACGAGCCATTCCCCGTGTAGATTGTCCAGTTTATGCATCATACCTAAACGGTACAGGATGGGATCCAAGAGGTCTACGACCTGTACTTATGCCGACATTTTGTGTTTTTGAAGTAAATGCTCAAGAGCCACTATGGCGTCACAAAGGGGAAGATGTTGAGGGTGGTCTAAATAACAATTATTTAGTCGCTCGGTATCCCACACAAGTTGGTAATTATGATTACATAGTTGATTTTCAATTCTATCTTGATGGGCGAATAAAAACTACCGTGTCAGCCACAGGTTTCATTCAAGGATCATTTTGGAACCCTTCGTCTGATGTCAATACCCCATTCGGGTACAGAGTTACGAACACTTTGATTGGCCCAATCCACGACCATACGTTTGGCTTTAAAGTTGACATGGACGTGGCGGGGAAAGAGAATGATTTTCAATTAGTTCATTGGAAATATGGACACAATACACGTGCAATGATGGGAAATAATTCAAATATGACAGATACTCCAAACTACTTATTTTACAATCACACTAGATTTATAGAGTGGGAGAAATTAGAAAAAGAAACTGGTCTAAACATTGACGGAGAGAACCAAAAATACTGGACAATAATTAATAGAAACAAACAAAACAGAAACGGAGTTGATCGTGGATATCGAATCATCCCCATGGCAACGAGTGCTCAAAATATACCAGACGACTATCCTCGAATGAGAGAGTTATCTTTCACAAAATATCACTGTGCAATAACTAAACAGAAAGACAACGAACAATATTTAAAACCTTTATATTTCCCAGTGGCCAATACGTCTAAAAACGAATCTTCTCTGTCTCAGCTATACTTAGAGGACATGCTTGACGGAGAGTCTATTGCAAACGAAGATTTAGTGACTTGGTTATCAGTTGGATTTCTGCACATTCCAACATCTGAAGATGTTCCCATGACAATACGCGTAGAATCAGGGTTCACACTTAAACCTTTTAATTTCTTTGACAGGACTGCGACTTTCGATGTACCAGCCCTCATTATATTTAATAACACAGTCTATGACAATGCTCCAGTTCCAGATAAATGTCTGTCAAATCCTTCACCTATCACACACTGA

Transcript

Bpl_scaf_20847-5.8

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01179	Cu_amine_oxid	Copper amine oxidase, enzyme domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000269	Family	Copper amine oxidase	Interproscan
IPR015798	Domain	Copper amine oxidase, catalytic domain	Interproscan
IPR016182	Homologous_superfamily	Copper amine oxidase, N-terminal	Interproscan
IPR036460	Homologous_superfamily	Copper amine oxidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10638	COPPER AMINE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008131	Molecular Function	primary methylamine oxidase activity	Interproscan
GO:0009308	Biological Process	amine metabolic process	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00276	AOC3, AOC2, tynA; primary-amine oxidase	EC:1.4.3.21	Glycine, serine and threonine metabolism	ko00260	PMID: 28812709
			Tyrosine metabolism	ko00350	PMID: 28812709
			Phenylalanine metabolism	ko00360	PMID: 28812709
			beta-Alanine metabolism	ko00410	PMID: 28812709
			Isoquinoline alkaloid biosynthesis	ko00950	PMID: 28812709
			Tropane, piperidine and pyridine alkaloid biosynthesis	ko00960	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_20847-5.8 global RNA-seq network