| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_20165-2.9 | DOM-3 RELATED | Bpl_scaf_20165 | 269158 | 273847 | - |
| CDS | |||||
| Bpl_scaf_20165-2.9 | |||||
| Transcript |
| Bpl_scaf_20165-2.9 |
| Protein |
| Bpl_scaf_20165-2.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08652 | RAI1 | RAI1 like PD-(D/E)XK nuclease | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013961 | Domain | RAI1-like | Interproscan |
| IPR039039 | Family | RAI1-like family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12395 | DOM-3 RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000956 | Biological Process | nuclear-transcribed mRNA catabolic process | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0034353 | Molecular Function | mRNA 5'-diphosphatase activity | Interproscan |
| GO:0090305 | Biological Process | obsolete nucleic acid phosphodiester bond hydrolysis | Interproscan |
| GO:0110155 | Biological Process | NAD-cap decapping | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14845 | RAI1, DOM3Z; RAT1-interacting protein | - | Transcription machinery | ko03021 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_20165-2.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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