Gene detail

Detailed information of Bpl_scaf_20126-0.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_20126-0.8	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	Bpl_scaf_20126	15722	32475	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_20126-0.8

GGAGAGACCCCACTTTATTGTGCAGCATCCAATTCAGATACTGGGGTGATTGAGTTGTTAATAGCACACGGAGCAGATCCGAATATCAGAACAGACGTTTATAGAACGCCTCTACATATTGCATCATCCAGGGGTTACGCCGAAACAGTTAAATTCTTACTTTTACTTGGAGCAGATATGGACATAGAAGACAGAGAGAATAAAACACCTTACCAACTTGCTGAGGAGAAAGGCCATTCAGATGTCATTAATGTGTACAAGGCATATTTGTCAGAAGGCATACCACTGGATGTTAAGTTACTAAATAACAAATTCAGTAGCGCTTTTGAAAAAGCATTGCTGTCTGGTTTCTACTATTCGTTTTCCGGCAAAGTATTGATTTTGGGGAACGCAAATGTAGGAAAAACATGTATAACTCGAATTCTCATTGGTATGAACCCCAACACGACAAGACAGTCAACTGAAGGAATTCAAGTCCATGTGAACAGAGTTTGCATTGATAGAGAGACTAAGAAATTAATCCCAGGAGAGATTAAATATGAAGACATAGCATCCGGTAATCTTCTCAGAGCTAAAACAGAGAGACACAGACTTGACAAAAAGAAAGTGAATGCGAAACTAAATGAAGAAGATGATTCAAGCAATGCCTTACTTTTGTCAAATTTGCCTTTGGGACATGATTTACAAGAAACGAAGGAAAAAGACGAAACAGACGAAAGTCCACCGGAATCAGAGGATATTCCCGGCAATGAATTTACATTCCTACAAAAACTCAAATCTTTTCTTGGAATGCAACGTGACATGACAATTCAAATTACATCAAAAATGATAATGGAAGGTGCCGTAAAGGCAAGAAAAAGGGGAATTAACTTGAATCTAGCTCCAGTTATCATCTTAGATTTTGCAGGTCAGGAAGTATTTTACTCTACTCATCAGTCGTTTATTACCCACCAAGGAATTTATGTTTTAGTCATAAATGGAAGCCTCAATCTTGATAGTGAAATCCCTTTGGAATCTTTCATCCCTGGTCGCCATAGTAAACCAACGACTAGAGGCTATATAATGTTTTGGGTGAGCTCAATCCTCACCTATTCAAAGGGTAAATCCAAGACGTTTCCCCAAATACTGCTTTGTTGTACACACAAGGATCAAGTTTCTAAAGAAAAGATAGAAATACAGCGAACATACATTTTTGATGAGGTTACAAGAATGTTTGAAAATACAGAAGAAATGTTTCATCTAGTTCTCAAACACCGCATTTTCATCAATGCAATTAATTCAAAAGATCCTGAAATAGCGGTACTCCAGAATGCAGTAGTAGAAATGATATGTGAACAGCCGTCATGGGGTAGAAAAATGCCAAAACCATGGATCCATTTAGAAATGGTAATTAATAAGAAGGTAGAGAAAGGTTTGAAAGTGATTCCTTTCAAAATGGTGGAAGAGATAAACCAAGATAATCCAGTAAAAGTATTAAGCAAAGAAGAGATTGTTTTATTTCTACAGGTACAGCATGCTCAGGGAAATATCATATACTTTGCACTTCCTGGTCTCCGTGACTACATTATCATATCTCCATCTTACGTCATAGACGCATTTACATCAATTGTCACAGACAAGAGGTTTTGCAAGGGCCAGCGCCTTAGGTCTTTACAATCAATGAATCGAGATGGAATTCTGGGAAAACTGGATATTAACACAATATGGGAACCGACACAATTCCTGAAACATAAGGATTTCATTATTTGCCTTATGTGTCACTTAGATATTCTTGCAGAACCAAGAGTATATAACCCAGAGAATCACTCATTAATACCATCACAATTTTATTATGTGCCGAGTATGGTATCAAAGGGAGGTTATCCATCCTTCCTCGAAAGCGAAGATTTAGCATCAAGATCAGTCGGTCTCTCCTTCAAGTTTCATAGTGCAATACTACCATCTGCAATTGGCTATAGATTTATGGCATGTTGTCTAGACATGTGGGAGGTGAAAACTATCAATGAGGAGAAATTACTTTTCTCTGGATTAGTAGTCTTGATTATCAACAGAGCATTGATGCTTCTTGTAAGCGTTAAAGAACAGAGAATAGATGCTTTTCTAATACACTCAGCTTCACGACATCAAATTATACCAGACTTGGCTGCAAGTATTCGAGAATGTCTAAATGATACCTTAGAAAGAATATCACATAGCTATGAAATAGTATCTGAGGGAAATATTGCTACTGGAAATAATAGGACATTTCATGTAGAATTTACTTGCAATCACGTGACATCGCCATGTTATTTTTACGGAGAAGAGAACAACACCTGTCTACACACTAACAACCCTCTACTAGACAGTTCTACTATATGGTTTGTTTATAAAGTAAGTAAAATATTAAACCCCATTCAAATGTAA

Transcript

Bpl_scaf_20126-0.8

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050776	Family	Ankyrin Repeat and Cyclin-Dependent Kinase Inhibitor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24201	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_20126-0.8 global RNA-seq network