| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_19710-0.10 | RNA-BINDING PROTEIN NOB1 | Bpl_scaf_19710 | 29507 | 48247 | - |
| CDS | |||||
| Bpl_scaf_19710-0.10 | |||||
| Transcript |
| Bpl_scaf_19710-0.10 |
| Protein |
| Bpl_scaf_19710-0.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08772 | NOB1_Zn_bind | Nin one binding (NOB1) Zn-ribbon like | Domain | Interproscan |
| PF17146 | PIN_6 | PIN domain of ribonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014881 | Domain | Nin one binding (NOB1) Zn-ribbon-like | Interproscan |
| IPR017117 | Family | Ribonuclease Nob1, eukaryote | Interproscan |
| IPR033411 | Domain | Ribonuclease, PIN domain | Interproscan |
| IPR036283 | Homologous_superfamily | NOB1 zinc finger-like superfamily | Interproscan |
| IPR039907 | Family | RNA-binding protein NOB1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12814 | RNA-BINDING PROTEIN NOB1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004521 | Molecular Function | RNA endonuclease activity | Interproscan |
| GO:0030490 | Biological Process | maturation of SSU-rRNA | Interproscan |
| GO:0030688 | Cellular Component | preribosome, small subunit precursor | Interproscan |
| GO:0042274 | Biological Process | ribosomal small subunit biogenesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11883 | NOB1; RNA-binding protein NOB1 | - | Ribosome biogenesis in eukaryotes | ko03008 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_19710-0.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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