Gene detail

Detailed information of Bpl_scaf_19671-7.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_19671-7.10	WD-40 REPEAT PROTEIN	Bpl_scaf_19671	685307	737067	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_19671-7.10

ATGATCAAGATGAATGAGGTCAATAAATATGATGACGTAGAATTAATCACAGAATGGCCAATAACCAAAACAGAAAACAATGATATGTCACAAAGTCGAAAAGAGTCTGTCGCCACAGCAAACAAGCATGATGTCTATCTCAAAGCTAATCATTCGAAACATAAGACAACACAGTTTATTGGTTCAGAGTGTTTTTCAAAGAGATCGAAATATAGCAAGGAACAAGAGAGTCTGGCTAGTACTGCATTAGCAAAATGGTGGAAACGTCGCCAATGTAAACAAGAAGATCTAGATGTAGTGAAAGGATGCAATCCAAATACACTTATTAAAATGATATCAAGATTACCAGATGCTAAAGAATTCATAAGTGAAGAGATTAAAAGATTAAGAAATAAATTGAAATCTGGATTAGCCCAGGGAGACGTTCATGCTGCACTGGGAACGTTCTTAGAGAAGAATGGTGATGCACAAGAAGCTGTATATCATTTTGAGGAAGCCATTAAATTAGATCCACATGAAAAGGAATATCAGTGGCTGTTACAGAAAGCAAAAAGAATTTTAAGAATACAGAAGATACAACATGAAAATCATTGCACACTCAAGAAAGTTTCAACTTTCCCTCCCACAAAACAGGTAGAAAGAAGATCTGCCAAAAATCTGACAGTAGAAGATTTCTATAGTAACTATGAATGTACAAGTACTCCTCTAATTATTACTGACCAGCAAGTGACCACTGAACCATGGACATTGGAACATGTAAAAGAAAAAGCAGGTAGCTGTCATGTGACATTGAAGAAGCCAATGAAACACTCAGTAGAATGGGCCAGACTAGAAAGCAGTAAGACAGTATCTGTGTCGTCCTACATCAGTGATATTTTACATGGTACATTAGAGGAACCATTGTATCTGTTTGATTGGAGTATACCACTCAATTGTCCAGACTTGGCAAAACAACTTATTATACCCAAATATTTTGCAGGAGATTTCCTACAGAGGACCAATGAAGGGAGTCTATACAGAGACAGTTGGCCAAGCTTGTTTGTAGCACCTACAGGAATTACAAGTGAACTCCATGTTGATGCATTTGGTTCTAACTTTTGGATGGCTTTATTCCAAGGAAAAAAACGATGGATATTCTTCCCTAAATCTGATGTGCCATATTTATATCCAGAGTATGACCATTCCTTAGATCCAGTGTTTGATGTTGATTTATCAAAACCAGACATGGACAAATATCAATTGTTACAGCTGACAACACCTGTGGAATGTATTCTTCAACCAGGTGAAATGTTGTTTGTACCAGCAGGATGTCCTCACCGTGTTGAAAACCTTGAACCATCGCTAGCCATTTCTTCAAATTTTGTTGACAAATCTAATTTTGACCACGTAAAACAGGAACTTGAAATCAATTCACATATGGATATTAGATCTGAAGAACTTCTTCTACAGTTTAATGATGTTAACTTTAATGAAAGTATGGACATGGATATTAAAGACAAAATAAGGCTACCACCCAGAAAGATGACAGACACACCAATTGATGTTCCTAGATTGGAACTTGATTCAATTATAGGATTTAATGGAGCTGTAACTGGAGGCTTAAAGGTTCATCCTGATAGAGAATATTTGATATACCCACTTGGTAACACTGTGGTAATAGAACATGTGACAACAAAAGCACTAACACAACTGTCAGGTCATACCAATAGTGTTTCCTGTATTGCTGTATCACCTTCAGGAAATTACTTAGCTTCAGGACAGGTCAATCATATGGGATTTAAGGCTGATGTTATTGTATGGGATTTTCATAGAAAGGAGAAAATAGCCAACCTAAGCTTACACAAAGTAAAAGTACAAGATTTAGCCTTCTCACCAAATGAGAAGTATCTTGTTACACTAGGTGGTCAGGATGATGGAAGTGTTGTGGTGTGGGATCTAGCTAACAAACAGTGTATTGATGCCATCTGTGGAAACCAAGCTCAAGTAGAGAGTGCTGGAGTAACATACTGTGTAGCATACTCCAATATCAGCGATGATATCTTTGTAACAGGAGGAGATGGTACTTTGAGAGTGTGGGAACTTGAAAGGGAAAACAGAAAAATCAAACCCACAGATGTTACCATGGGTCAAATAAAAAGAATTGTAAAATGTATCCAGATGGCAGACCACATGGCAGAACCTTTCTTTTTCTGTGGTACGACAACTGGTGACATCATTGGTATCAACATGAGAACCAGATTCTTCCAAGTCCAGGGTCCAAAGAAAGAATTATTTAGTCTTGGTGTTACAGCATTAGCTCTTCTCAAATCTGGTGATTTCTTGGTGGGCGCTGGTGATGGAGAGGTAGCACTTGTAAAATTTTTCAAGAAACCAGACAAAAAGGAAGTTATGTTTGAAAAGAAGAGGTCATGGAAAGACAAAAATCTAACCAATCTGTCGACTGCTGCAATCACATCAATAGCTCTCAGAGGAGATGGCCATCAATTCTATATTGGTGCTGCCAGCTCCCAAGTTTATAGATTTAATTATGCTGAGTTTGTCAGTGGCGGTTGTGACCAGAAACAAGTCAATAAGAAAACTGGTCTAAAAATAGAAAAAAAAACACAGACAGACGACAAAGGTGTAGAACTGGTTAAAACCTGTCATTCAAAATCTGTCAGAGATGTTGTGTTCCCATATGGTTTTTCAAATTTAATTGTGACATGCCAAGAAGAAGAAATAAGAGTATGGAACATGTCAACTAAAAAAGAAATTCTACGACATGTGGTAGCTAATATGACATGTAATGCTGTCTGTATAACCAGAGATGGAAAAACAATCATTAGTGCTTGGGATGATGGTAAAATTAGAGGATATGGGTTTGACAAAAGTGGAAAAAGTTTAAAGGAGAAATTTGTACGGGGAGAAGCACATAGTAAAGGAGTTACTGCCATTGCTTGTACGTCTGATGGAAACCGTATCGTCAGTGGAGGAGGTGAAGGTCAAGTACGCATATGGGACATTAACAGAAGTATGGACATGAAAGGCAATGATGTATATATTCTGAAACTGACCGAGACTATGATGGAACATAAAGGAACAGTGGCTGATATTAAGATTATTAAAGGAGACAACGAATGTGCAACAGCTAGTAATGATGGAACTTGTATTATTTGGGATTTAGAATCAAAGAGAAGAAAGGGAATTGTTTTTGCCAACACATTATTCAAATGTTTAACATATGATGCAAAAGAAGTACAGTTAGTAACCAGTGGTACAGATAGGAAAATAGGTTTTTGGGAAACTCATGGTGAGGGAGAGAGGATACGAGAATTAGATGGCTCAATCAGTGGTTCTGTAAATGCTATAGATCTGTCACCTGATGGTAGATACTTAGTGACAGGAGGAGACGATAGAATGATTAAGGTATGGACATACCAGGAAGGTGAATGTGTAGCCGTTGGTATTGGACATAGTGACTCTGTCAACAAAGTTAAAGTCTGTCCTAACCAGAATAATATTGTCAGTGTCAGTGATGACGGAGCTATTCTCATATGGAAATTCCCTTTCACTCCTAGATGTTAG

Transcript

Bpl_scaf_19671-7.10

TTGAAATATATCAGTTCAAGATATTTATCGATGAACAGAATTTTATGAATATACATTTTGTACAAATATTAGTAAACTGCTTTTCTACAAAAGCATGAGATATCGCGCTGTACATATTGCGGATGAATATTTACTCTGGTTTCCTTTTTAATATTACCTCGATTGGAACCAGTATAACCTGCTAACCTTGGGGGAAATTTTTCGACATGGGAGAAATAATTAAGCAGTATGAAGGCAAAATCTTCAAATTGCTTGACCGTCTTCCCATACAAGATGAAATTGTACCAGCATATACAAAGCAGAAACGTTTTGAGACCAGCGTAGAAAATATACCTAAACGATTTGGTGTTGGAACCGGTTTCTTGAAAACCTTAACAAAATTCTTGGCAAAATCAGAAGTCGGAAAATATCCAAAGGAGTACAAACCCAGAATACACGGACCATACTACCCAAGTCGTTATTATGGAACAGCTACCCCATTAGCGGAGGTAAAACTTGCTGAAGTTCCCAAGTGGGTAGCTACCAGAGAAAAATCATTCACATCTTTTGCGAGAATGATGAGCAGAGCATTTTGGAAATGGAATTTAACATATCTTCAACCCAAACGTCCAGGGATGACTCCAATATACCAGTTGGTCTCTTTCTGCTCGCTATACTTCTTCATCTGGAAATATAAATCCCACATTAATGAAAGACATGCTAAATACCATTGAAGACAGACAACATTAGTGTACTAGTAGATTGTCAACAAAAAAGACACTTGTTTGTTTATTAATAGATTTTGACCAAAAAAAGTGTTTAATTGTTAATGCTGTGTTTCAGTTTGTGGAAATAACTTGAACATATATACAATCAATTGAATGAATATATGAAATTATTGTGTTAGTAGTTTTCTTGTCTAGACATGAAACAAGGATAGATGAAGAGATCAATCATCAATGGTTTTCTTGTGTCACAGTGCAATATCCTGAAATGATCAAGATGAATGAGGTCAATAAATATGATGACGTAGAATTAATCACAGAATGGCCAATAACCAAAACAGAAAACAATGATATGTCACAAAGTCGAAAAGAGTCTGTCGCCACAGCAAACAAGCATGATGTCTATCTCAAAGCTAATCATTCGAAACATAAGACAACACAGTTTATTGGTTCAGAGTGTTTTTCAAAGAGATCGAAATATAGCAAGGAACAAGAGAGTCTGGCTAGTACTGCATTAGCAAAATGGTGGAAACGTCGCCAATGTAAACAAGAAGATCTAGATGTAGTGAAAGGATGCAATCCAAATACACTTATTAAAATGATATCAAGATTACCAGATGCTAAAGAATTCATAAGTGAAGAGATTAAAAGATTAAGAAATAAATTGAAATCTGGATTAGCCCAGGGAGACGTTCATGCTGCACTGGGAACGTTCTTAGAGAAGAATGGTGATGCACAAGAAGCTGTATATCATTTTGAGGAAGCCATTAAATTAGATCCACATGAAAAGGAATATCAGTGGCTGTTACAGAAAGCAAAAAGAATTTTAAGAATACAGAAGATACAACATGAAAATCATTGCACACTCAAGAAAGTTTCAACTTTCCCTCCCACAAAACAGGTAGAAAGAAGATCTGCCAAAAATCTGACAGTAGAAGATTTCTATAGTAACTATGAATGTACAAGTACTCCTCTAATTATTACTGACCAGCAAGTGACCACTGAACCATGGACATTGGAACATGTAAAAGAAAAAGCAGGTAGCTGTCATGTGACATTGAAGAAGCCAATGAAACACTCAGTAGAATGGGCCAGACTAGAAAGCAGTAAGACAGTATCTGTGTCGTCCTACATCAGTGATATTTTACATGGTACATTAGAGGAACCATTGTATCTGTTTGATTGGAGTATACCACTCAATTGTCCAGACTTGGCAAAACAACTTATTATACCCAAATATTTTGCAGGAGATTTCCTACAGAGGACCAATGAAGGGAGTCTATACAGAGACAGTTGGCCAAGCTTGTTTGTAGCACCTACAGGAATTACAAGTGAACTCCATGTTGATGCATTTGGTTCTAACTTTTGGATGGCTTTATTCCAAGGAAAAAAACGATGGATATTCTTCCCTAAATCTGATGTGCCATATTTATATCCAGAGTATGACCATTCCTTAGATCCAGTGTTTGATGTTGATTTATCAAAACCAGACATGGACAAATATCAATTGTTACAGCTGACAACACCTGTGGAATGTATTCTTCAACCAGGTGAAATGTTGTTTGTACCAGCAGGATGTCCTCACCGTGTTGAAAACCTTGAACCATCGCTAGCCATTTCTTCAAATTTTGTTGACAAATCTAATTTTGACCACGTAAAACAGGAACTTGAAATCAATTCACATATGGATATTAGATCTGAAGAACTTCTTCTACAGTTTAATGATGTTAACTTTAATGAAAGTATGGACATGGATATTAAAGACAAAATAAGGCTACCACCCAGAAAGATGACAGACACACCAATTGATGTTCCTAGATTGGAACTTGATTCAATTATAGGATTTAATGGAGCTGTAACTGGAGGCTTAAAGGTTCATCCTGATAGAGAATATTTGATATACCCACTTGGTAACACTGTGGTAATAGAACATGTGACAACAAAAGCACTAACACAACTGTCAGGTCATACCAATAGTGTTTCCTGTATTGCTGTATCACCTTCAGGAAATTACTTAGCTTCAGGACAGGTCAATCATATGGGATTTAAGGCTGATGTTATTGTATGGGATTTTCATAGAAAGGAGAAAATAGCCAACCTAAGCTTACACAAAGTAAAAGTACAAGATTTAGCCTTCTCACCAAATGAGAAGTATCTTGTTACACTAGGTGGTCAGGATGATGGAAGTGTTGTGGTGTGGGATCTAGCTAACAAACAGTGTATTGATGCCATCTGTGGAAACCAAGCTCAAGTAGAGAGTGCTGGAGTAACATACTGTGTAGCATACTCCAATATCAGCGATGATATCTTTGTAACAGGAGGAGATGGTACTTTGAGAGTGTGGGAACTTGAAAGGGAAAACAGAAAAATCAAACCCACAGATGTTACCATGGGTCAAATAAAAAGAATTGTAAAATGTATCCAGATGGCAGACCACATGGCAGAACCTTTCTTTTTCTGTGGTACGACAACTGGTGACATCATTGGTATCAACATGAGAACCAGATTCTTCCAAGTCCAGGGTCCAAAGAAAGAATTATTTAGTCTTGGTGTTACAGCATTAGCTCTTCTCAAATCTGGTGATTTCTTGGTGGGCGCTGGTGATGGAGAGGTAGCACTTGTAAAATTTTTCAAGAAACCAGACAAAAAGGAAGTTATGTTTGAAAAGAAGAGGTCATGGAAAGACAAAAATCTAACCAATCTGTCGACTGCTGCAATCACATCAATAGCTCTCAGAGGAGATGGCCATCAATTCTATATTGGTGCTGCCAGCTCCCAAGTTTATAGATTTAATTATGCTGAGTTTGTCAGTGGCGGTTGTGACCAGAAACAAGTCAATAAGAAAACTGGTCTAAAAATAGAAAAAAAAACACAGACAGACGACAAAGGTGTAGAACTGGTTAAAACCTGTCATTCAAAATCTGTCAGAGATGTTGTGTTCCCATATGGTTTTTCAAATTTAATTGTGACATGCCAAGAAGAAGAAATAAGAGTATGGAACATGTCAACTAAAAAAGAAATTCTACGACATGTGGTAGCTAATATGACATGTAATGCTGTCTGTATAACCAGAGATGGAAAAACAATCATTAGTGCTTGGGATGATGGTAAAATTAGAGGATATGGGTTTGACAAAAGTGGAAAAAGTTTAAAGGAGAAATTTGTACGGGGAGAAGCACATAGTAAAGGAGTTACTGCCATTGCTTGTACGTCTGATGGAAACCGTATCGTCAGTGGAGGAGGTGAAGGTCAAGTACGCATATGGGACATTAACAGAAGTATGGACATGAAAGGCAATGATGTATATATTCTGAAACTGACCGAGACTATGATGGAACATAAAGGAACAGTGGCTGATATTAAGATTATTAAAGGAGACAACGAATGTGCAACAGCTAGTAATGATGGAACTTGTATTATTTGGGATTTAGAATCAAAGAGAAGAAAGGGAATTGTTTTTGCCAACACATTATTCAAATGTTTAACATATGATGCAAAAGAAGTACAGTTAGTAACCAGTGGTACAGATAGGAAAATAGGTTTTTGGGAAACTCATGGTGAGGGAGAGAGGATACGAGAATTAGATGGCTCAATCAGTGGTTCTGTAAATGCTATAGATCTGTCACCTGATGGTAGATACTTAGTGACAGGAGGAGACGATAGAATGATTAAGGTATGGACATACCAGGAAGGTGAATGTGTAGCCGTTGGTATTGGACATAGTGACTCTGTCAACAAAGTTAAAGTCTGTCCTAACCAGAATAATATTGTCAGTGTCAGTGATGACGGAGCTATTCTCATATGGAAATTCCCTTTCACTCCTAGATGTTAGAACGAAAATTATAAAATTGCATTAACTGTTCATCGATCTGTCTAAAAAATATGAACAACTTGAATGAATAAACATTAGATTGATTGATAATTATCTAATGACTGTGATATATATATTATGTTATACTCCCAATTGTTAAGAGAACGACTGTAAAAGACGTGGTGGGTGCTGAGTGTTGGAGACTGTACATGTATTTCCAATTTTATTTATTTTGTTACATTGTAAAACTGTTAAGTGGATATTGACACTGCAGACTGCCCATTTACAAATAGTTTGATTTGTTTTGAAAGATTTTAGCAATGAAACATTTTCCCTCTTTTTTTTTGTGGTAATTCTTGAAACTGCCATTGTAATTATTCAATCTATCATTTTCTGAAAATGTTTCTCGAGATGCTAACCTTTGCATCAGCTATTGTTATTATCATTTGCAGATGTAGATTTCACGTTTGTAACATAGCTGATAGCAGTACACTACAACTGCATGTTGTTTGTAACTGTTTCTTTCTTTTTTTTTTATCTGCATTTAAACAATATTTTTTCATATTTTCATAGATCTGATTCTTTATAAAAATGTAAATATTTATTTGTAAATGAAGTATATTTATCATCAAGACAATAAAATGATGGAAAACACTG

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR003347	Domain	JmjC domain	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan
IPR050630	Family	WD repeat Echinoderm Microtubule-associated Protein-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13720	WD-40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_19671-7.10 global RNA-seq network