Gene detail

Detailed information of Bpl_scaf_19387-5.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_19387-5.5	2-OXOGLUTARATE DEHYDROGENASE	Bpl_scaf_19387	509078	547156	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_19387-5.5

ACAGGTGGAAGATCACTTGATATAACAAGTGAAAACTTTCAGATATTCAGATTAGCAGAAGCTTATAGAAAACATGGTCATAAAAAAGCTACACTTGATCCGTTAGGACTTCAACAAAGAATTGCCCCACCAGAGTTAGGTCTGTCATTGTATGGATTGTCTACTGAGTCCTCAGATCAGTTCAACGTGGAAGGAATTATTGGTACAAATCAAACTAGATTGACAACGACAGAACTAGTGAATACATTAGAGGAAATTTACTGTGGACCAATAGCTGTGGAGTATGATCATGTTCAGACAACAGAAGAGAGAGAATGGTTTATTGATGTATTTGAATCTCAGAGAAAAACACCAGTACCTAATGAAAGAAAAATTGAGCTGGCAAAATTGATGCTAAAATGTCAGGCTTTTGACCACTTTCTTGCCAATAAGTTTACCACAGTAAAGAGGTATGGAGGAGAAGGTGGAGAAAGTATGATGGCCATCTTTGATGAAATATTCTCACAAAGTGTTCAAAAAAATGTATCTAACATAGTTATGTGTATGCCTCACAGAGGAAGACTTAATTTTCTTACCTGTATGTTGAAGTTCCCACCTGTAGTCATGTTTCAAAAGATGAAAGGTAAATCAGAGCTACCACCTAATGCTAAAGGAAGCGGTGATGTTTTATCTCATCTTTATACATCAGAGGACATTCAGTATCATGGGAAAGATCTCCACGTGTCACTCATACCTAACCCTTCACATTTAGAGGCAAACAATCCAGTAGCAGTTGGTAAAGTACGTTCTAAACAGCAAAGATTAAAAGTAGGAGAATACAGTGAGTCAGACAATACAGACCAACAAGTCTTATGTGTACAGGTACATGGAGATGCTTCATTTGCTGCTCAGGGTGTGGTAGCAGAAACATTTGTATTTGCTGATTGTCCACATTTTGATGTTGGTGGTAGTATACATATCATTGTCAATAATCAGATAGGATTCACAACAGAGGCTAGTAGAGCAAGATCATCACTATACAGCAGTTGTCTGGCTAAAATCAACAATTATCCAGTAATACATGTGAATGCTGATTATCCCGAGGAGGTCATAAGAGCCACATCAATAGCTATGCAGTATCAACAGAGATTTGGTAAAGATGTTATTATAGACTTTATATGTTATCGTAAATATGGTCATAATGAACTAGATGATCCAACGTTTACACAGCCTACAATGTATAGTGTTATTAACCAGAGGAAAAGTATTCCTGATATGTTCTCTGACCAATTAATTACTGACGGTATCTGTAGTAAAGATGATATAGACAAGACAATAACTGACTGGAATAAAGAATTATCTGACCATCTTGATAAAGTAGATAAACATGTACCAAAGCCGTTTCATCTTCAATCAGCCTGGTCAGAATGTCAACAGGCAGGTGAATCAGTGACCTCATGGGATACTGGTGTGTTAGTAGATACGTTGAAATATGTAGGCGTGAAGTCTGTGACAGTACCTTCTGATCTGGATGTTCACCCTACTATACAGAAAACACATATGGACAGACGCAAACAAAAAATGGAGGAAGGGGCTAACTTAGACTGGGCTACAGCAGAAGCTTTAGCTCTTGGTTCTCTGCTGTACCAAGGTTTTAATGTAAGGATTAGCGGGCAGGATGTAGGACGTGGAACATTTAGTCATCGTCATGGTATGATAGTAGACCAGAAAACTGACAGTGTATGGATACCACTGAATCACATTACAGAGGATCAAAAAGGATTTCTAGAGTTAGCTAATAGCTGCCTATCTGAGGAAGCAGTGTTGGGATTTGAGTATGGTATGAGTATAGATGACCCTAAGAATCTAATTATATGGGAGGCACAGTTTGGTGATTTCTTCAATGGAGCTCAAATCATGATTGATACCTATATTGCTAGTGGGGAATTAAAATGGTTACTTCAAAGTGATTTAGTGATGTTGTTACCTCATGGTATGGATGGAGCAGGACCTGAACATTCCTCTTGTAGAGTAGAGAGATTCCTCCAGTTAACTGACAGTAGTGAACACAAAGTAGATGGAGACAATGTTAACTTACAAGTTGTCAACCCTACTACTCCAGCTCAATATTTTCACCTATTGAGACGACAGGTGATACGAAACTTTAGGAAACCTCTAATTGTGGTAGCTCCTAAAGTCATATTACGACTTCCTGCTGCTACTTCATCCTTACAAGATATGTCACCTGGTACATCATTCTTACCTGTGATTGGTGATGCCAAGGTCAAAGGTGATAAGGTCAAAAAGGTCATCTTCTGTAGTGGTAAACATTACTATACACTGGATAAAGAAAGAGATTCCAGGAAGTTAAATGATGTAGCTGTTGTGAGATTAGAGAGTTTATGTCCATTCCCTACAGCAGAAATTCAACAAGAGATGAAGAAATATCCTAATGCAACAGACTTTATTTGGAGCCAGGAAGAACACAGAAACATGGGAGCTTGGTCATTTGTCTCTACAAGATTTCTAAATGTTGTTGGCTATAAGCTACGGTATGTTGGAAGAGACCATTTGGGTACTCCTGCTACCGGTGTAGGTGAAATCCACAGACAAGAAAATAGTCAAATTATAGAAGACACTTTCAGTTAA

Transcript

Bpl_scaf_19387-5.5

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00676	E1_dh	Dehydrogenase E1 component	Family	Interproscan
PF02779	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan
PF16870	OxoGdeHyase_C	2-oxoglutarate dehydrogenase C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001017	Domain	Dehydrogenase, E1 component	Interproscan
IPR005475	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR011603	Family	2-oxoglutarate dehydrogenase E1 component	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR031717	Domain	Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal	Interproscan
IPR042179	Homologous_superfamily	Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23152	2-OXOGLUTARATE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016624	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15791	DHKTD1; 2-oxoadipate dehydrogenase E1 component	EC:1.2.4.-	Lysine degradation	ko00310	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_19387-5.5 global RNA-seq network