Gene detail

Detailed information of Bpl_scaf_19361-2.2 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_19361-2.2	DEP DOMAIN PROTEIN	Bpl_scaf_19361	154220	210595	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_19361-2.2

ATGTGTTCAACTTTAGCTTATTCAAGGGACGAAATTACAATATGTACACTTGGTGTAGGAATATCATTTGGAGAGTCCATTCTGACCAACCAGCCAAGACAGGCCACAGTGAGAAATCAAACATTATTGGAAGATGTCATAACTCCACTCAGTTCTTTAACATTAACAAATGCACACAAACATCAGTATGAATTGTCCCCACAGATATCAAGATCAAGGAAAAGTAGTGGTACTAACCTGATGCCTTCCCAGAAGTTGTCAAAAGCAGCAAACATTCTTCGTGTTATGATACTTACAAGAGCCCCTCACATGATTAGGGACAGGAAGTACCATTTACGAACATATCGCAGATGCATGGTGGGCACTGAAATGGTGGACTGGCTATTACAACAGAGCACATTGGTCTATTCACGTAATCAAGCTGTAGGAATCTGGCAAGCACTTCTTGAAGAAGGATTGATAGTACATGTATGTCATGAGCATCAGTTTAAGGATAAATACTTATTTTACCGATTTCGTCAAGACGACCAAGGAGTTGGTACAGTGCCATCACATAACGAGAAAAGGGAAGCTGAAGAAGAGTTACAAGACATTCTACTGACGTTAGCCCAGATTGGACCTGACGCCATGATGAGGATGATATTACGTAAACTGATACAACATCACCATCCTGTCTGTAACAATATTGTCTCTGGCTTGGTCTTCATATTCTCTGTCCTATCTAAGTCTAAAGCTCATGTTGCTGTGGTTTGTTGTCGTTTTGATAAAGCCTGGTTTGTTGCCTCTCTTATAAAGCTTGGTTTGTTGCATCTCTTGCAGCTCATGGTGTCGTGGGTTGTTGTCTATCTTATAAAGCCTGGTTGGTTGCCTCTCTTGCAGCTCATGGTGCTGTGGTATGCTACCTCTCTTGCAGCTCATGGTGCCATGGTTTGTTGTCTTTCTTATAAAGCCTGGTATGCTACCTCTCTTGCAGCTCATGGTGCCATGGTTTGGTGTCTTTCTTATAAAGCCTGGTTTGTTAACTCTCTTGCAGCTCATGGTGTTGTGGTTTGTTGTCTATCTTATACAGCCTGGTTTGTTGTCTATCTTATACAGCCTGATCATGGTGTCATGGTCTGTTGTCTATCTTATAAAGCCTGGTTTGTTACCTCTCTTGCAGCTCATGGTGTTGTGGTTTGTTGCCTCTCTTATAAAGCCTGGTTTGTTGCATCTCTTGCAGATCATGGTGTCATGGTTTGTTGTCTATCTTATAAAGCCTGGTATGCTACCTCTCTTGCAGCTCATGGTGCCATGGTTTGTTGCCTTTCTTATAAAGCCTGGTATGCTACCTCTCTTGCAGCTCATGGTGCCATGGTTTGTTGCCTCTATTTTAAAGCTTGGTTTGTTGCCTCTCTTGCAGCTCATAGTGCTGTGGTTTGTTGTCTATCTTATAAAACCTGGTTTGTTGCATCTCTTGCAGCTCATGGTGTCATGGTTGGTTGTCGTTCTGATAAAGCCTGGTTTGTTGCCTCTATTATAAAGCTTGGTTTGTTGCCTCTCTTGCAGCTCATGGTGCCATGGTTTGGTGTCTTTCTTATAAAGCTTGGTTTGTTCCCTCTCTTGCAGCTCATGGTGTTGTGGTTTGTTGTCTATCTTATAAAGCCTGGTTTGTTCCCTCTCTTGCAGCTCATGGTGTTGTGGTTTGTTGTCTATCTTATAAAGCCTGGTTTGTTGCATCTTGCAGATCATGGTGTCATGGTTTGTTGTCTATCTTATAAAGCCTGGTTTGTTGCATCTCTTGTAGCTCATGGTGTCATGGTTGGTTGTCGTTCTGATAAAGCCTGGTTTGTTGTCTATCTTATTCAGCCTGCTCATGGTGCCATGGTCTGTTGTCTATCTTATAAAGCCTGGTTTGTTGCCTCTCTTGTAGCTCATGGTGTCGTGGTTGGTTGTCGTTCTGATAAAGCATGGTTTGTTGTCTATCTTATACTGCCTGCCTGGTTTGTTGCCTCTCTTGTAGCTCATAGTGCTGTGGTTTGTTGTCTATCTTATAAAGCCTGGTTGGTTGCCTCTTTTGCAGCTCACGGTGTTGTGGTTTGTTGCCTCTATTATACAGCTTGGTTTGTTGCCTCTCTTGTAGCTCATAGTGCTGTGGTTTGTTGTCTTTCTTATAAAGCCTGGTTTGTTGCCTCTCTTGCAGCTCATGGTGTTGTGCATCTAGTAGCATCAACAATTAGCTGTGGATTAAGAGCATTGACAGTTCATAGTAAGGATGATGATCTGTTGAAAGTTCTACTGTGGAAACGTGATGCATCACCAACATTAAAGTGTTAG

Transcript

Bpl_scaf_19361-2.2

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00610	DEP	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000591	Domain	DEP domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR051832	Family	Regulators of mTOR signaling and Rac activation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22829	DEP DOMAIN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0023051	Biological Process	regulation of signaling	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04351	RAPGEF4, EPAC2; Rap guanine nucleotide exchange factor 4	-	Rap1 signaling pathway	ko04015	PMID: 28812709
			Phospholipase D signaling pathway	ko04072	PMID: 28812709
			cAMP signaling pathway	ko04024	PMID: 28812709
			Leukocyte transendothelial migration	ko04670	PMID: 28812709
			Insulin secretion	ko04911	PMID: 28812709
			Adrenergic signaling in cardiomyocytes	ko04261	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_19361-2.2 global RNA-seq network