Gene detail

Detailed information of Bpl_scaf_1905-2.20 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_1905-2.20	HEAT SHOCK PROTEIN 70KDA	Bpl_scaf_1905	218473	225421	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_1905-2.20

ATGTATTCTCAAAAACGAAACAAAGCCATTGAAGTCGAAATCCAAGAGAAATCTATCAGTAAAGACCAAAGTGTAAATAGTAAGGAAAGGATCAAAAGAATTGTCATACCTATGAAATACGTATTGTTTGTGTCATTAGTCCTACTGGGACTTAACTGTGTCATGTCCAAAGATGGAAATTCAAAGAAAGATAATGTTGGTACAGTAATTGGAATTGACTTGGGAACAACTTATTCGTGTGTTGGTGTTTATACAAATGGTAGAGTTGAAATTATTGCCAATGACCAGGGTAACAGAATTACTCCATCCTATGTGGCCTTCACCGAAGATGGGGAGCGTCTGATTGGTGATTCAGCTAAAAACCAACTGACAACAAATCCAGAAAACACCATATTTGATGTCAAACGTATGATCGGCCGCGACTGGGATGACAAAGCCGTTCAAAGTGACATTAAACATTACCCTTTCAAGGTTGTCAACAAAAACAAAAGTCCACAAATTCAAGTTAACGTTGGAGAATCTGGTAAGAAAAACTTTGCTCCAGAAGAAATATCGGCCATGGTTTTGGGTAAAATGAGAGACATTGCAGAAGGTTTTCTCGGGGAAAAGGTAACAAATGCTGTCGTGACTGTTCCGGCCTACTTCAATGACGCACAGAGACAGGCTACCAAAGATGCTGGTATGATTGCTGGTCTTAATGTCATGAGGATCATCAATGAACCAACTGCAGCTGCTATTGCCTATGGTCTGAACAAGAAAGGTGAGAAAAATGTCCTGGTGTTTGATCTGGGAGGAGGTACCTTTGACGTCTCATTACTAACTATTGATAATGGCGTATTTGAGGTAGCTGCAACTAATGGTGACACTCATTTGGGAGGTGAAGATTTTGATCAAAGAGTAATGGAGCATTTCTATAAATTAATCAAGAAGAAGAAGGGACAAGATATCAGAAAAGACGTCAGAGCCGTTCAAAAACTTAGACGTGAAGTTGAAAAGGCCAAGAGAGCTCTGTCGTCTGCTCATCAGACCAGCATTGAAATTGAATCTTTGTATGAAGGAGAAGATTTCTCTGAAACACTAACCAGAGCTAAATTTGAGGAATTAAACATGGATTTATTCAGAGCTACAATGAAACCAGTCCAGAAAGTATTGGAGGATGCTGGCATGAAGAAAGATGAAATTGATGAAATTGTACTTGTCGGTGGATCTACTAGAATACCCAAAATACAACAACTTGTCAGAGATCATTTCAATGGAAAGGAACCAAATAGGGGAGTTAATCCTGATGAAGCTGTTGCTTATGGTGCTGCCGTCCAAGCTGGAATTCTGGGAGGTCATGACGAGACTAATGAACTCTTAGTTTTGGATATCAACCCATTGACCTTGGGGATAGAAACAGTCGGTGGAGTGATGACAAAACTTATACCACGTAACACCCCCATTCCAACAAAGAAATCTCAAATATTCTCCACAGCAGCCGACAATCAACCATCCGTGACCATTCAGGTTTTGGAAGGCGAACGTCCCATGTCAAAAGACAATCATATGCTTGGACAATTTGACTTGACAGGCATTCCACCAGCAAAAAGAGGCGTACCTCAGATCGAAGTCACGTTTGAAATTGATGCAAATAGTATTCTGAAAGTTAGCGCTGAAGATAAAGGTACAGGACAGAAAAATGATATAGTGATTCAAAATGATAATAATAGGCTATCAAAAGAGGACATCGAACGTATGATAAATGACGCTGAAAAGTTCTCAGAGGAAGACAAAGCTGTAAAAGAAAAAGTGGAGGCTAAAAATGATTTAGAAGGACTAACATACAATCTAAAAAACCAAATAGATGATAAAGAAAAACTTGGAGGAAAATTAAATGACGACGAAAAATCGACGATAGAAAATGCCGTAGATGAAAAAATAAAATGGTTAGACAGTAATCCAGATGCAACCGTAGAGGAAATGAAATCTCAGAAAAAGTCATTAGAGGAAGTCGTTAATCCAATCATTAGTAAAATATACCAAAATAGTGGAAGTGCGTCACCTCCGGAAACGGAAGAGGATGGATCTGAAAGAGCTGAATTATAG

Transcript

Bpl_scaf_1905-2.20

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013126	Family	Heat shock protein 70 family	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR029047	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR029048	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR042050	Domain	Endoplasmic reticulum chaperone BIP, nucleotide-binding domain	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005788	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0034663	Cellular Component	endoplasmic reticulum chaperone complex	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09490	HSPA5, BIP; heat shock 70kDa protein 5	-	Protein export	ko03060	PMID: 28812709
			Protein processing in endoplasmic reticulum	ko04141	PMID: 28812709
			Thyroid hormone synthesis	ko04918	PMID: 28812709
			Prion diseases	ko05020	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_1905-2.20 global RNA-seq network