Gene detail

Detailed information of Bpl_scaf_1905-1.32 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_1905-1.32	FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS	Bpl_scaf_1905	112407	145033	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_1905-1.32

ATGATGGCAGATATGATGAGGTCTGGTGGTGACTCGTCCCTGAGTCCACTGAGACACAACTCTGCCAGTGAATATAATTTCACAAGTGACTCTGAGAAGTCGGATGTCAAAGTTGAAAATGCTAATGACTCTGACTTCAATGATCCAGCATCACCCCTGTCCAGTACACAAGATCATGTGTCTTCAACAGAGAAAAAGAAAGGGCGTAATACGAATCAGTTACAGTATCTTCTAAAGAATGTTATGAGAACAGTTTGGAAACATCAGTATTCCTGGCCTTTCCAGAAGCCTGTAGATCCAGCTATTCTTAATCTTCCAGATATTGTTTTGATGGCACAAGTATTGGAGAAACTTTTTCTTCAAAAAGTGGCACAGATGCCTGCAGAGGAAGCCGAAGTTGTTCCATCATCTAAAAAGACTCCAAAAAATAAATTTGGTGCTAAAACTGCTACTCCCAAGAACTCTGTTATAGGGAAAACATTATCTACTCCCACCCCTGTGAATTCTGAAATTCCCTCCACCCAGTCATCACAACCTTCTACGACCTCTGTAGCACCAGCATCAACAACAGTAGTAACAGTAGCTCCACCTAGTCAAACCGTGCCGTCGGCCCCAGTTACAACGCCTGTAGCAGCGGAGACCACGGGGACATACACAAATCACAGTATCTCTGAACCTGCTGTCGTTCCTCCTCAAGCACCTACTAAAACTTTAAAAAGAGGTGTGAAAAGAAAAGCAGACACCACAACTCCAGTTGTGGCAACCATGCCAAAGGATCCGGCTCTTGAACCTACCTTAAAAATTGAGAAAGTTGTACCATCAAAAATTCCTACTACCCGACGAGAAAGCAATCGACCGATCAAAAAACCAAAGAGAGATTTACTTGAAGAAGATTCGCCGGATCCAGAAAAAACGGTTGCAAAAAGTAAGAAAGGGAAACTATCAGAACAGCTCAAATTTTGCAATAATATGATTAAAGAATTGATAGCCAAAAAGCATGCCGGTTATGCTTGGCCATTTTACAAACCAGTGGATGCAGAAATGTTGGGTCTACATGATTATTATGAAATTATTAAAAAGCCTATGGATTTAGGCAGTATCAAGTCGTCTTCAGAGTTTGCTGATGATGTGCGAATTATATTTACAAATTGTTATAGATACAATCCCCCGGATAGTGATGTTGTTATGATGGCAAAAAAACTGCAAGACGTTTTTGAAATGAAATATGCAAAATTGCCAGATGAGCCTGCTTCTGCCAATGGCGACAAAGCAGATAGTAGTGACTCGTCAGAAAGTGAATCAGAATCGGATGATGATAGCGAAGAAGAAAGAGAAGTTAAAATTAAGAGTTTGCAAGAAGAGTTGAAAAAAATTCAGGAAGAATTAGGGAAATTGACAGAGGAACATATGCAAAAATTAAAACAGAAAAAAGAGAAAAGTGAAAAAAAGAAGAAAAAGAAAAAGGAGAAACTTGATAAGAAAGAAAAGGTGATAGAGACACCAATTACTGTGCCATCAAGCACAAACACAACGTCAGTGACACCGTCTGTGAACGCTATTAAAACTCCTAAAGTGAAAGCTACGAAAAAGTTGCCATTAGAACCAAAGAGTACAAAGAAAAAAACGCCTACTGTTCGTACTCCTAGTGCTAAAAAAAATAAGGTGGTGGCAGCTGGGAATGGTGGTGTTCCACCTGTGGCATTCGATAGTGATGATGAAGACAATGCTAAGCCAATGACTTATGATGAAAAACGACAACTCAGTTTGGATATCAATAAACTTCCAGCCAAAAAAGCCTCGGGTAAATCACGTGAAGAAGTTCAAGAAGAGAAAAAGAAGGAATTGGAGAAAAAATTGCAAGAAGTTCACAATAAGCTCGGAAGTAGTGCAAAGAAACCAAAAGGAGAAGAAGGTGGTGTAGTTAATGTTGATGGAGCCAGCCGTTTAACAGATGGTAGCAGTAGTTCTTCTGGTACCGACTCCAGCAGCGATAGCAGTTCATCAAGTTCTTCGGAGTCGAGCGATTCTGAGTCAGGTTAG

Transcript

Bpl_scaf_1905-1.32

CTTCTGTGAAGACGTAGCGATCATTTGTGTTCGAAAGATCAGCCGAGTTTGTTGCATTCTAGCTCCGTAATGTCAAATATTTTGGAAATTTTCAAATCATAACATTATGGAGAATAAGTTTATGTTCTTCTGGACCTAAATTTTAAACAAATATAACTGGATTTTCACTATTTTAAAAAGTTCTTCTTGTCATGTGACAGCAAGTAGCCAATGAAATTCGTCGTTTTTTGTCTAGGTGTATAAATACCATTCAAAAGCCGGGATGGTCGGTTATGTTGATGAATGAAACGCTGAGGGTCCTGTTGAATCATGTGGATTGTATGGACATGACGAGCCATCCGACACTACAAAGGTTTCAGCAGAGCACCCCAGTGACCAGTTCAGGGTACTTTAAAAAATTGATAATGTCCATTTAGTGTTTTGTATGGACATGTACTGGGAAGATAGACACCCAGTGGGACGTATTTGTTCATGTACAATCTCTATGATTTAATTAATACAAAATGATGGCAGATATGATGAGGTCTGGTGGTGACTCGTCCCTGAGTCCACTGAGACACAACTCTGCCAGTGAATATAATTTCACAAGTGACTCTGAGAAGTCGGATGTCAAAGTTGAAAATGCTAATGACTCTGACTTCAATGATCCAGCATCACCCCTGTCCAGTACACAAGATCATGTGTCTTCAACAGAGAAAAAGAAAGGGCGTAATACGAATCAGTTACAGTATCTTCTAAAGAATGTTATGAGAACAGTTTGGAAACATCAGTATTCCTGGCCTTTCCAGAAGCCTGTAGATCCAGCTATTCTTAATCTTCCAGATATTGTTTTGATGGCACAAGTATTGGAGAAACTTTTTCTTCAAAAAGTGGCACAGATGCCTGCAGAGGAAGCCGAAGTTGTTCCATCATCTAAAAAGACTCCAAAAAATAAATTTGGTGCTAAAACTGCTACTCCCAAGAACTCTGTTATAGGGAAAACATTATCTACTCCCACCCCTGTGAATTCTGAAATTCCCTCCACCCAGTCATCACAACCTTCTACGACCTCTGTAGCACCAGCATCAACAACAGTAGTAACAGTAGCTCCACCTAGTCAAACCGTGCCGTCGGCCCCAGTTACAACGCCTGTAGCAGCGGAGACCACGGGGACATACACAAATCACAGTATCTCTGAACCTGCTGTCGTTCCTCCTCAAGCACCTACTAAAACTTTAAAAAGAGGTGTGAAAAGAAAAGCAGACACCACAACTCCAGTTGTGGCAACCATGCCAAAGGATCCGGCTCTTGAACCTACCTTAAAAATTGAGAAAGTTGTACCATCAAAAATTCCTACTACCCGACGAGAAAGCAATCGACCGATCAAAAAACCAAAGAGAGATTTACTTGAAGAAGATTCGCCGGATCCAGAAAAAACGGTTGCAAAAAGTAAGAAAGGGAAACTATCAGAACAGCTCAAATTTTGCAATAATATGATTAAAGAATTGATAGCCAAAAAGCATGCCGGTTATGCTTGGCCATTTTACAAACCAGTGGATGCAGAAATGTTGGGTCTACATGATTATTATGAAATTATTAAAAAGCCTATGGATTTAGGCAGTATCAAGTCGTCTTCAGAGTTTGCTGATGATGTGCGAATTATATTTACAAATTGTTATAGATACAATCCCCCGGATAGTGATGTTGTTATGATGGCAAAAAAACTGCAAGACGTTTTTGAAATGAAATATGCAAAATTGCCAGATGAGCCTGCTTCTGCCAATGGCGACAAAGCAGATAGTAGTGACTCGTCAGAAAGTGAATCAGAATCGGATGATGATAGCGAAGAAGAAAGAGAAGTTAAAATTAAGAGTTTGCAAGAAGAGTTGAAAAAAATTCAGGAAGAATTAGGGAAATTGACAGAGGAACATATGCAAAAATTAAAACAGAAAAAAGAGAAAAGTGAAAAAAAGAAGAAAAAGAAAAAGGAGAAACTTGATAAGAAAGAAAAGGTGATAGAGACACCAATTACTGTGCCATCAAGCACAAACACAACGTCAGTGACACCGTCTGTGAACGCTATTAAAACTCCTAAAGTGAAAGCTACGAAAAAGTTGCCATTAGAACCAAAGAGTACAAAGAAAAAAACGCCTACTGTTCGTACTCCTAGTGCTAAAAAAAATAAGGTGGTGGCAGCTGGGAATGGTGGTGTTCCACCTGTGGCATTCGATAGTGATGATGAAGACAATGCTAAGCCAATGACTTATGATGAAAAACGACAACTCAGTTTGGATATCAATAAACTTCCAGCCAAAAAAGCCTCGGGTAAATCACGTGAAGAAGTTCAAGAAGAGAAAAAGAAGGAATTGGAGAAAAAATTGCAAGAAGTTCACAATAAGCTCGGAAGTAGTGCAAAGAAACCAAAAGGAGAAGAAGGTGGTGTAGTTAATGTTGATGGAGCCAGCCGTTTAACAGATGGTAGCAGTAGTTCTTCTGGTACCGACTCCAGCAGCGATAGCAGTTCATCAAGTTCTTCGGAGTCGAGCGATTCTGAGTCAGGTTAGAGAATGGCCACAAGCAAACAAAAAACACTTCTTCACACAATGATCTGAGCATATATCATAATTCTTCGTCATAAAAAAATGTCTGTTGTGTGGTCATCGTCATCCAAACATCTCATTGCTGAATGTTCCATCGCGTCATTTTGCTGAATGTGTATTAGATTGCATTGGTTGTGCAAGAAATTTTTATTTGGGTGAGCAGCAGGGCTGTGTAAAGGTGGATTTTTTATATAATTTATCAATCATTTTATGTGTTTTTTTTCTAGAGGTTATTGAAATCCAACATATATTATAATTTAATTTTTTAAGAACAAATAATCGCCAAGAGTGCAGAATGTGTTATGATGTTGAGGTCGGCTAAATGTTTGTTACATTGTTCTTTTAACATTGATATGAGCCATGAGAACGTACCGTTATTACCCTTTTATCTCGAACATCTTCTTTACTAAAGATGTTGCCATGCCGTTTTTTTTTTAAAACAAGTCTACCTGTGCATGAATATTTACATTTAAAAATTTGGACTTTTATCGTTTTATATAACCAAGAAATTTTTGCAAAATTAAATATAAATGTGCAATTCTTATTTCACATAATTTTACCTTAAATTTTTTTTCTAAGAATTGAAAACATTGTATTCTTTATTGAACACATGGTTTGATGTTCAAAAATTTCATACCATTAATTTTGACAAGTGTTAAAATAGAGTGTAGAAACATGGCCTCATCATCACACATTACAGCACTCCATGGCTAATATCATTGTCCATTCCTTGTTGTCAAGATCATGTTATTTATGTACTTTGAAAATTTACGCACATTTTTTGAACAAACAATGTTATACTAAAAAGAAAACGTTTTATAAAATGCTTAATTTTACATATATTGTGCAGTGTCATTACATTTTTTGTTCTTTTGTTTTTCTACAAGAAATATTGTAAATAAATCATATAGCTAAAAAATTTGCTTTATTATAGTTATACAAATTTTTTGTATTGTATCATTTTATAGTGTAGATTTTCATTTTGTGTAAATACACTGACCCCATTGTCAAATTATTGTAGATCTCATG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439	Bromodomain	Bromodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487	Domain	Bromodomain	Interproscan
IPR036427	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR038336	Homologous_superfamily	NET domain superfamily	Interproscan
IPR043509	Domain	Brdt, bromodomain, repeat II	Interproscan
IPR050935	Family	Bromodomain-containing chromatin reader	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22880	FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000785	Cellular Component	chromatin	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0070577	Molecular Function	lysine-acetylated histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11722	BRD4; bromodomain-containing protein 4	-	Protein kinases	ko01001	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_1905-1.32 global RNA-seq network