| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_18092-0.8 | U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN | Bpl_scaf_18092 | 11943 | 29885 | + |
| CDS | |||||
| Bpl_scaf_18092-0.8 | |||||
| Transcript |
| Bpl_scaf_18092-0.8 |
| Protein |
| Bpl_scaf_18092-0.8 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_PIM |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18036 | Ubiquitin_4 | Ubiquitin-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR039690 | Family | U11/U12 small nuclear ribonucleoprotein 25kDa protein | Interproscan |
| IPR040610 | Domain | SNRNP25, ubiquitin-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14942 | U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005689 | Cellular Component | U12-type spliceosomal complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13153 | SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein | - | Spliceosome | ko03041 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_18092-0.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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