Gene detail

Detailed information of Bpl_scaf_18092-0.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_18092-0.7	TUBULIN-SPECIFIC CHAPERONE E	Bpl_scaf_18092	51795	68701	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_18092-0.7

ATTTTTATGAACTGATCGATATAATCTTGCAGAGAAAACGTATTTTTGTGCTTAGATAATTAAGAATGTTGTATATTTTAAATCATTTCAATAAAATAAAAAATTACTGACAAATATTATTGTGTGTTGAACATCATGCAAATGAAAACAAAAACAAAGTAAATCGTGGCATTTGACCTCTTGGAATCATAGTTAAAAATACGCACACAGTATTAAATAGTTTTGACAACCTGCCTTCGACCCTTGAAGCTGGAGAAAAAAGAATATGGAGCAAGATAGACGCAGACAGAAAAGAAAGAGAAAGATGTCGTTTACAGAGGCATTGAAGCAGAAGTATTGTGTTGACCAAAACTCGGAGAATATGTCCATGTCTGGATTTACGATTAAAATTGCCTTTCATGGCAAACCTAAGACTAACGGTTCAGACGCTGAATTGGCCTACTTAAGAAATGTGATTTTGAATGATACTGGGATGTGTAAAGCAGGATTGCCACACGATGGTCTAAGGTCATTGTGTCCAAATGTGGTTGACCTTGACATCTCAGATAATTTGCTGAGTAACTGGAGTGAAGTGTTGAACATCTTATCCCAGCTACCATGTCTTAAATATGTTAATGTGGCCAGAAATCCATTAGAAAGCAAGAGTCCTGTACTCGAAAAATGGGACACGTCACTACCAGGCATAGAGAACTTAGTCCTGAATGGGACAATGGTACCGTGGTCTGACATACTGAAACTGTCAAAACATATTCCATCTCTGAAAGAACTACATCTTTGTGAAAATGATTATGACAAGGTGACGTGTAACAATACAGATATAACCCAGCATTTACCTAACCTTAACTGTCTTAGACTTAACAGTAACAAAATACAGAGTTGGGATGAAATCTGGAAGTTACGCCATTTACCCAATTTACAGTCGTTAATCTTATCAGAAAATCCTCTCATTGAAGTGGCATATGAACATAATAAAGATGATGATGTCACAGATATCTGTGTTTGTAGCCATGGCAACACAGACTTGAATGGTAATGAAGATGCCCGAAAAGAAATTCAAAATATTGTAAACAATTTGGTGCAAGATACTTTCAAAAGTGTTGAAGTAGAGGAAATGGTGCTTGGAAGTTTTGAAGATACACTATATGTTCCGGAAGAGTCATGTGATACATCACATGATGTTGAAAATGATGAATCTGAAGAGATGGGAGACAACTCTGAATGTGATATTTTTGAAATGTCTATTGAAGAAGTTTCTGATGATAATGGTATTGTTTGTTCGAAGTGTGGGAAATTTAAAAGAGATATTTTACAAACGAAGCCATTCTCTAATCTGTCCAGTTTGTGTCTCAGTCAAACAAAACTCAAAGACTGGAAACACATAGAGGCATTGAGTAGATTCCCCTCTTTGAAGTCTGTTAGAGTCATGGATATAGACTTAACAACAGAAATAAGCAACGATGACAGGAGAAAATTACAGATTGCTAGTTTACCAAATATAAATATCCTGAATGGGAGTGAAGTTGCATGGGCAGAGCGAGATAAAGCAGAAAGGCATTATTTACGATTCTTCATGGACAAAGAAGATAAACCAGACCAATATTACAGGCTTGAGAAAAAACATGGGAAACCTAAGCCTATTGTTGACATTAACATTGGTCGTCCAAGAGGTTTCCAGGAATGGATTAACCTTACTCTTGTCTACAAAGACCAGTCTGTGACATCCAGAGTAAGAGTTGTAGAACCTGTTGGCAAATTACGCCTCTTTGCTGCTAGAAAATTTTGTCTTTACGCCTCGTTAAGGAATTTTAAGATGTATCATTTGGCATGTGGTCCATGTCATAAAGTGGAGGACAAAGTGTTCGAAGAATTACGATGTGAGACGCTACCGATGAGTCGCTTTGACATCATGGAAGGGGACCAAGTCCACATAGACTTAGACGAGGAAGATTGTTATACGAAACCCAAGGGATTTCTCCATTACATAACCGTGGGATCGTACATGGACAGTTACCAGAGTGTGACCCCAGTCCCAAATACTCCACCAAAAAATATTGCATTTGTTGTAAAATAACCTGTTACAAGAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR044994	Family	Tubulin-specific chaperone E	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15140	TUBULIN-SPECIFIC CHAPERONE E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0007021	Biological Process	tubulin complex assembly	Interproscan
GO:0007023	Biological Process	post-chaperonin tubulin folding pathway	Interproscan
GO:0043014	Molecular Function	alpha-tubulin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_18092-0.7 global RNA-seq network