| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_17899-3.34 | METHIONINE SYNTHASE | Bpl_scaf_17899 | 342204 | 366671 | - |
| CDS | |||||
| Bpl_scaf_17899-3.34 | |||||
| Transcript |
| Bpl_scaf_17899-3.34 |
| Protein |
| Bpl_scaf_17899-3.34 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00809 | Pterin_bind | Pterin binding enzyme | Domain | Interproscan |
| PF02574 | S-methyl_trans | Homocysteine S-methyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000489 | Domain | Pterin-binding domain | Interproscan |
| IPR003726 | Domain | Homocysteine-binding domain | Interproscan |
| IPR003759 | Domain | Cobalamin (vitamin B12)-binding module, cap domain | Interproscan |
| IPR011005 | Homologous_superfamily | Dihydropteroate synthase-like superfamily | Interproscan |
| IPR036589 | Homologous_superfamily | Homocysteine-binding domain superfamily | Interproscan |
| IPR036594 | Homologous_superfamily | Methionine synthase domain | Interproscan |
| IPR050554 | Family | Methionine Synthase/Corrinoid | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45833 | METHIONINE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0008705 | Molecular Function | methionine synthase activity | Interproscan |
| GO:0009086 | Biological Process | methionine biosynthetic process | Interproscan |
| GO:0042558 | Biological Process | pteridine-containing compound metabolic process | Interproscan |
| GO:0044237 | Biological Process | obsolete cellular metabolic process | Interproscan |
| GO:0046653 | Biological Process | tetrahydrofolate metabolic process | Interproscan |
| GO:0050667 | Biological Process | homocysteine metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00548 | metH, MTR; 5-methyltetrahydrofolate--homocysteine methyltransferase | EC:2.1.1.13 | Biosynthesis of amino acids | ko01230 | PMID: 28812709 |
| Cysteine and methionine metabolism | ko00270 | PMID: 28812709 | |||
| Selenocompound metabolism | ko00450 | PMID: 28812709 | |||
| One carbon pool by folate | ko00670 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_17899-3.34 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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