Detailed information of Bpl_scaf_17780-0.2 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_17780-0.2TRANSCRIPTION ELONGATION FACTOR SPT6Bpl_scaf_1778013394597-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14635HHH_7Helix-hairpin-helix motif DomainInterproscan
PF14639YqgFHolliday-junction resolvase-like of SPT6 DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006641DomainYqgF/RNase H-like domainInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR017072FamilyTranscription elongation factor Spt6Interproscan
IPR028231DomainTranscription elongation factor Spt6, YqgF domainInterproscan
IPR032706DomainTranscription elongation factor Spt6, helix-hairpin-helix motifInterproscan
IPR037027Homologous_superfamilyYqgF/RNase H-like domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for Bpl_scaf_17780-0.2 global RNA-seq network
TOP