Gene detail

Detailed information of Bpl_scaf_17641-2.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_17641-2.8	SOLUTE CARRIER FAMILY 17	Bpl_scaf_17641	186167	221767	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_17641-2.8

ATGAAAGCCGACGACGAAGCCGACGAAAAAGACAAACGTGATAATAACTTTGAAGCAATGTCATCAAGGAAAACGAATCAGGGTAATCATGGAAACTACATTCTGAATGATCATGAATTCTCGGTCAACAATGAAGAATCCGACCCACTCTACAACAACGATAAAAGGGATCAAGATACAATTGAAACAAAAATGAATAGTTCGGAACCTGTTCTTGACAACGATGACGAAACATGTCCACTGGATACACAGAATGAGAACAAAAATAACAATTCGAATTCCGTCATTGTAGTTATTGAAAACATTAGGAGAAAGATGTTGTACAAAATCAGCGACAGACCATCAATACAGTCTTCTATATTCTTTGCCTTCCAAAATCTCCTGCTTGCATTACCGTGGAATTTGACGGTTGTAATACTGGTGGCAGAAGTTGTTTGTGCCGAAGACGATTACGAACTGAAAGCCAAACTATTATCAACTACAATTTTATTGAGTGGAATAACAACATTAGTACAAGTGACCTTCGGTGTAAGACTACCCGTTTATCAAGGCCCAACAACTGGTTATGTTATACCATTGCTAGCATTAAAGTCTCTAGATGAATGGAAGTGTGAACTGCCACAAGAAATGACAGGGATGACGAATGTAACATATGGAAATCAAAGTCTGGCTTTAAACGCCACTAAGGAAGAACTTATAAGAGAACATTTAGTTTTACCAAGACTTCAGTTGATGAAAGGGTCGTTGATTTTAGCTGGGTCTATTCATGCAGTGACTGGACTTACAGGAATGGTCGGATTCCTACTGAGATTTATTGGACCAATCACAGTCATTCCTACTATTCTTCTGATGGGCCTGAGTCTATACAAAGCTGTCACTGGATTTTGCGCCATACACTGGGGTATTGCTGGCTCAACAACAACAATATCGTTGATCCTGTCGTTATATCTGTCTGGTTGGAGGATGCCCATACCTATATGGACTAGACAAAGAGGGTTCCATATCACACGATACCCGTTACAACAAGTCTTATCTATGTTAATAGCAATTATGATGGGATGGGGCATAGCCGGCATACTTACAGTTTCTGGTGTTCTTACAAACGACAAAAGTAATAATCAATACAAGGCTAGAACTGATGCACGGAGTGAGGTTATATCTAACACTCCCTGGTTTTATATACCTTATCCAGGTCAGTTCGGTGGTGTGGACTTTCAGGCAGGACTATTCGTAGCATTTCTAAATGCAACATTTGTATCAATTATAGACTCCATCGCAGATTATTATGCATGCGCCAGAATATCGCGTGCTCCACCACCACCAGTACATGCGGTAAATCGAGGAATAGCAGTTGAAGGGATTATGTGCATGATATCAGGCTTGTTCGGTATTGGACACGGGACAACAACGTATGGAGGACAAATAGGTTCAATAGGGATAACAAAGGTTGCAAGCGTATACGTGTATCAGGTTTTTGGAGTAATGCTGATACTGTGTGCAATAGTTGGTAAATTTGCCGCCATATTTATAACAATACCGTATCCAGTGTTAGGCGGAGTACAAATCATGGGCTTTGGGATGTTTATTGGGCTAGTATTATCAAATTTGCAATATATTGACATGCAGTCGTCACGGAATCTTGCAGTGATAGGTATTTCCATTATGGTAGGCCTGATGATTCCGTTCTGGGCTACGAACAATCCAAACGCTTTACAAACAGAAAAAGTTCCAACATTTACCTCACAAAGATTTATACTGGCCTATATGTTTTTTATGGGGTACTTCAATATTTATGCAGTTAGAGTGAACTTAAGTGTGGCAATTGTATGCATGGTTAGAACACCAGTGTATAACCAAACACTCATTACGTCATCGTATGATAATGTAACACAAGGTAACCAATGTGGTACACTAGAGGAAAGGAGTCTAAAGAGTAATGAGCGTGCTGAATTCGACTGGGATAAGGGTACCAGATCGACTATCTTATCATCTTTCTTTTACGGATACATCATCACACAAATTCCTGGTGGATGGTTGGCTGACAGGTTTGGTGGTAGGCGTGTCATGGGCATCTCGATGATACTCTGTGGCATAACAACAATTCTGATGCCAGTATGTGCTCGAACATCAATTGTTTTGGTGTATGTTCTACGCATACTCTTAGGGTTAGCGTCGGGTGTTGTATTTCCTGCTGGTCATTCTATGTGGGGAAGATGGGCGCCACGATTAGAGAGAAGCAAACTGGTGACCACTTCATTTGGTGGAGCGTGGGTTGGAATTATTGTAACATTTGCGGTATCTGGGTTATTATGTGAATACGGATTTGACAACGGATGGGGTTCAATATTCTATATAACTGGTGGATTGTGTCTGATATGGGTAGTCGTATGGTTTTACCAAATTAGAGATTCACCACAGCAACACCCAAGGATAAGTGAGGCCGAGCTTAAATATATCACAGAGAATATCGAGTATGATACGTCTAAAAAGGTAACGGATGTTCCTTGGAAAGAAATGTCCAAATCGGTTGTGTTGTGGGTTGGTATATGTTGTCACATGTGTGCTAACTGGGGAATATATACATTGATTATCAGTATGCCAGCTTTTATGAAAGACGTTCTTAAGTTTGATATCAAGAGCAATGGATTGTTATCTTCAATACCATACATGTGTGCCTCTGTGATGGCGATATCAGCAGGATATTTAGCAGATTATATAAGGACTAAGAACATACTGACAACAAGACAAACCAGAAAACTATTCCAGTCTATTGCTTTCATTGGAGCGGGAACGTTTTTGGTGGCAACTGGATTTGTGCCCTGTGAGAAACGTTACCTTGCTGTAGTTTTTCTTTGTTTAGCTCTCACGTTAAAGGCATGCGGTAGAGGTGGATTTTCGGTAAATCATATTGATGTTGCTCCAAAGTATGCAGGAATCTTACTTGGCATAACAAATACCATGGGAACAATTCCTGGAATGGTGTCGCCAATCGTAGTCGGAGCATTAACACCAAATGATTCACAAGAAGAATGGAGAACTATATTTTATATTTGCGCGGGAATTTATTTGTTTGGAACAATTGTATATGGCAGTTTTGCACGTGGTGAGGTTCAATCATGGGCGAAAGATAAAGAAGATGAGAAGTCTGATCCACCAATTATCATGAACTAA

Transcript

Bpl_scaf_17641-2.8

GTTCAACTAATCTGCTACTGGTTTATCACACAATGATGATGGAACGGTAGATTGTCGTATAAAAGAAAGTCTTTTAAAGAAAAGTAATTCCACCGACGATGAAAGCCGACGACGAAGCCGACGAAAAAGACAAACGTGATAATAACTTTGAAGCAATGTCATCAAGGAAAACGAATCAGGGTAATCATGGAAACTACATTCTGAATGATCATGAATTCTCGGTCAACAATGAAGAATCCGACCCACTCTACAACAACGATAAAAGGGATCAAGATACAATTGAAACAAAAATGAATAGTTCGGAACCTGTTCTTGACAACGATGACGAAACATGTCCACTGGATACACAGAATGAGAACAAAAATAACAATTCGAATTCCGTCATTGTAGTTATTGAAAACATTAGGAGAAAGATGTTGTACAAAATCAGCGACAGACCATCAATACAGTCTTCTATATTCTTTGCCTTCCAAAATCTCCTGCTTGCATTACCGTGGAATTTGACGGTTGTAATACTGGTGGCAGAAGTTGTTTGTGCCGAAGACGATTACGAACTGAAAGCCAAACTATTATCAACTACAATTTTATTGAGTGGAATAACAACATTAGTACAAGTGACCTTCGGTGTAAGACTACCCGTTTATCAAGGCCCAACAACTGGTTATGTTATACCATTGCTAGCATTAAAGTCTCTAGATGAATGGAAGTGTGAACTGCCACAAGAAATGACAGGGATGACGAATGTAACATATGGAAATCAAAGTCTGGCTTTAAACGCCACTAAGGAAGAACTTATAAGAGAACATTTAGTTTTACCAAGACTTCAGTTGATGAAAGGGTCGTTGATTTTAGCTGGGTCTATTCATGCAGTGACTGGACTTACAGGAATGGTCGGATTCCTACTGAGATTTATTGGACCAATCACAGTCATTCCTACTATTCTTCTGATGGGCCTGAGTCTATACAAAGCTGTCACTGGATTTTGCGCCATACACTGGGGTATTGCTGGCTCAACAACAACAATATCGTTGATCCTGTCGTTATATCTGTCTGGTTGGAGGATGCCCATACCTATATGGACTAGACAAAGAGGGTTCCATATCACACGATACCCGTTACAACAAGTCTTATCTATGTTAATAGCAATTATGATGGGATGGGGCATAGCCGGCATACTTACAGTTTCTGGTGTTCTTACAAACGACAAAAGTAATAATCAATACAAGGCTAGAACTGATGCACGGAGTGAGGTTATATCTAACACTCCCTGGTTTTATATACCTTATCCAGGTCAGTTCGGTGGTGTGGACTTTCAGGCAGGACTATTCGTAGCATTTCTAAATGCAACATTTGTATCAATTATAGACTCCATCGCAGATTATTATGCATGCGCCAGAATATCGCGTGCTCCACCACCACCAGTACATGCGGTAAATCGAGGAATAGCAGTTGAAGGGATTATGTGCATGATATCAGGCTTGTTCGGTATTGGACACGGGACAACAACGTATGGAGGACAAATAGGTTCAATAGGGATAACAAAGGTTGCAAGCGTATACGTGTATCAGGTTTTTGGAGTAATGCTGATACTGTGTGCAATAGTTGGTAAATTTGCCGCCATATTTATAACAATACCGTATCCAGTGTTAGGCGGAGTACAAATCATGGGCTTTGGGATGTTTATTGGGCTAGTATTATCAAATTTGCAATATATTGACATGCAGTCGTCACGGAATCTTGCAGTGATAGGTATTTCCATTATGGTAGGCCTGATGATTCCGTTCTGGGCTACGAACAATCCAAACGCTTTACAAACAGAAAAAGTTCCAACATTTACCTCACAAAGATTTATACTGGCCTATATGTTTTTTATGGGGTACTTCAATATTTATGCAGTTAGAGTGAACTTAAGTGTGGCAATTGTATGCATGGTTAGAACACCAGTGTATAACCAAACACTCATTACGTCATCGTATGATAATGTAACACAAGGTAACCAATGTGGTACACTAGAGGAAAGGAGTCTAAAGAGTAATGAGCGTGCTGAATTCGACTGGGATAAGGGTACCAGATCGACTATCTTATCATCTTTCTTTTACGGATACATCATCACACAAATTCCTGGTGGATGGTTGGCTGACAGGTTTGGTGGTAGGCGTGTCATGGGCATCTCGATGATACTCTGTGGCATAACAACAATTCTGATGCCAGTATGTGCTCGAACATCAATTGTTTTGGTGTATGTTCTACGCATACTCTTAGGGTTAGCGTCGGGTGTTGTATTTCCTGCTGGTCATTCTATGTGGGGAAGATGGGCGCCACGATTAGAGAGAAGCAAACTGGTGACCACTTCATTTGGTGGAGCGTGGGTTGGAATTATTGTAACATTTGCGGTATCTGGGTTATTATGTGAATACGGATTTGACAACGGATGGGGTTCAATATTCTATATAACTGGTGGATTGTGTCTGATATGGGTAGTCGTATGGTTTTACCAAATTAGAGATTCACCACAGCAACACCCAAGGATAAGTGAGGCCGAGCTTAAATATATCACAGAGAATATCGAGTATGATACGTCTAAAAAGGTAACGGATGTTCCTTGGAAAGAAATGTCCAAATCGGTTGTGTTGTGGGTTGGTATATGTTGTCACATGTGTGCTAACTGGGGAATATATACATTGATTATCAGTATGCCAGCTTTTATGAAAGACGTTCTTAAGTTTGATATCAAGAGCAATGGATTGTTATCTTCAATACCATACATGTGTGCCTCTGTGATGGCGATATCAGCAGGATATTTAGCAGATTATATAAGGACTAAGAACATACTGACAACAAGACAAACCAGAAAACTATTCCAGTCTATTGCTTTCATTGGAGCGGGAACGTTTTTGGTGGCAACTGGATTTGTGCCCTGTGAGAAACGTTACCTTGCTGTAGTTTTTCTTTGTTTAGCTCTCACGTTAAAGGCATGCGGTAGAGGTGGATTTTCGGTAAATCATATTGATGTTGCTCCAAAGTATGCAGGAATCTTACTTGGCATAACAAATACCATGGGAACAATTCCTGGAATGGTGTCGCCAATCGTAGTCGGAGCATTAACACCAAATGATTCACAAGAAGAATGGAGAACTATATTTTATATTTGCGCGGGAATTTATTTGTTTGGAACAATTGTATATGGCAGTTTTGCACGTGGTGAGGTTCAATCATGGGCGAAAGATAAAGAAGATGAGAAGTCTGATCCACCAATTATCATGAACTAACATATTCTAAACAGTAGCATATTCTAGTGAATGATAAATAAAAGTAAACAAACTCCAATTTTTTTAATCACGTTTATACGTCGTTTGTTGAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00860	Xan_ur_permease	Permease family	Family	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006043	Family	Nucleobase cation symporter 2 family	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050382	Family	Major Facilitator Superfamily Sodium/Anion Cotransporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11662	SOLUTE CARRIER FAMILY 17	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006820	Biological Process	monoatomic anion transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12301	SLC17A5; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 5	-	Lysosome	ko04142	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_17641-2.8 global RNA-seq network