| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_17533-5.52 | PROLIFERATING CELL NUCLEAR ANTIGEN | Bpl_scaf_17533 | 486866 | 493429 | - |
| CDS | |||||
| Bpl_scaf_17533-5.52 | |||||
| Transcript |
| Bpl_scaf_17533-5.52 |
| Protein |
| Bpl_scaf_17533-5.52 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00705 | PCNA_N | Proliferating cell nuclear antigen, N-terminal domain | Domain | Interproscan |
| PF02747 | PCNA_C | Proliferating cell nuclear antigen, C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000730 | Family | Proliferating cell nuclear antigen, PCNA | Interproscan |
| IPR022648 | Domain | Proliferating cell nuclear antigen, PCNA, N-terminal | Interproscan |
| IPR022649 | Domain | Proliferating cell nuclear antigen, PCNA, C-terminal | Interproscan |
| IPR022659 | Conserved_site | Proliferating cell nuclear antigen, PCNA, conserved site | Interproscan |
| IPR046938 | Homologous_superfamily | DNA clamp superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11352 | PROLIFERATING CELL NUCLEAR ANTIGEN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006272 | Biological Process | leading strand elongation | Interproscan |
| GO:0006275 | Biological Process | regulation of DNA replication | Interproscan |
| GO:0006298 | Biological Process | mismatch repair | Interproscan |
| GO:0019985 | Biological Process | translesion synthesis | Interproscan |
| GO:0030337 | Molecular Function | DNA polymerase processivity factor activity | Interproscan |
| GO:0043626 | Cellular Component | PCNA complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04802 | PCNA; proliferating cell nuclear antigen | - | DNA replication | ko03030 | PMID: 28812709 |
| Base excision repair | ko03410 | PMID: 28812709 | |||
| Nucleotide excision repair | ko03420 | PMID: 28812709 | |||
| Mismatch repair | ko03430 | PMID: 28812709 | |||
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Tight junction | ko04530 | PMID: 28812709 | |||
| HTLV-I infection | ko05166 | PMID: 28812709 | |||
| Hepatitis B | ko05161 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_17533-5.52 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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