Detailed information of Bpl_scaf_17407-1.10 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_17407-1.10SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITBpl_scaf_174075383797312+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00890FAD_binding_2FAD binding domainFamilyInterproscan
PF02910Succ_DH_flav_CFumarate reductase flavoprotein C-termDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003952Binding_siteFumarate reductase/succinate dehydrogenase, FAD-binding siteInterproscan
IPR003953DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan
IPR011281FamilySuccinate dehydrogenase, flavoprotein subunitInterproscan
IPR014006FamilySuccinate dehydrogenase/fumarate reductase, flavoprotein subunitInterproscan
IPR015939DomainFumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalInterproscan
IPR027477Homologous_superfamilySuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilyInterproscan
IPR030664FamilyFAD-dependent oxidoreductase SdhA/FrdA/AprAInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR037099Homologous_superfamilyFumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000104Molecular Functionsuccinate dehydrogenase activityInterproscan
GO:0005749Cellular Componentobsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)Interproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006121Biological Processmitochondrial electron transport, succinate to ubiquinoneInterproscan
GO:0008177Molecular Functionsuccinate dehydrogenase (quinone) activityInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0022900Biological Processelectron transport chainInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00234SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunitEC:1.3.5.1
Carbon metabolism ko01200PMID: 28812709
Citrate cycle (TCA cycle) ko00020PMID: 28812709
Oxidative phosphorylation ko00190PMID: 28812709
Alzheimer's disease ko05010PMID: 28812709
Parkinson's disease ko05012PMID: 28812709
Huntington's disease ko05016PMID: 28812709
Non-alcoholic fatty liver disease (NAFLD) ko04932PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_17407-1.10 global RNA-seq network
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