| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_17198-0.11 | T-BOX PROTEIN-RELATED | Bpl_scaf_17198 | 2643 | 14349 | - |
| CDS | |||||
| Bpl_scaf_17198-0.11 | |||||
| Transcript |
| Bpl_scaf_17198-0.11 |
| Protein |
| Bpl_scaf_17198-0.11 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | T-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00907 | T-box | T-box | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001699 | Family | T-box transcription factor | Interproscan |
| IPR008967 | Homologous_superfamily | p53-like transcription factor, DNA-binding domain superfamily | Interproscan |
| IPR036960 | Homologous_superfamily | T-box superfamily | Interproscan |
| IPR046360 | Domain | T-box transcription factor, DNA-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11267 | T-BOX PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0001708 | Biological Process | cell fate specification | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0045893 | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10172 | BRA, T; brachyury protein | - | Transcription factors | ko03000 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_17198-0.11 global RNA-seq network |