| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_17080-1.9 | SORTING NEXIN | Bpl_scaf_17080 | 56555 | 90614 | - |
| CDS | |||||
| Bpl_scaf_17080-1.9 | |||||
| Transcript |
| Bpl_scaf_17080-1.9 |
| Protein |
| Bpl_scaf_17080-1.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00787 | PX | PX domain | Domain | Interproscan |
| PF09325 | Vps5 | Vps5 C terminal like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR015404 | Domain | Sorting nexin/Vps5-like, C-terminal | Interproscan |
| IPR027267 | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10555 | SORTING NEXIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005768 | Cellular Component | endosome | Interproscan |
| GO:0010008 | Cellular Component | endosome membrane | Interproscan |
| GO:0034498 | Biological Process | early endosome to Golgi transport | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17917 | SNX1_2; sorting nexin-1/2 | - | Endocytosis | ko04144 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_17080-1.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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