Detailed information of Bpl_scaf_17051-19.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_17051-19.540S RIBOSOMAL PROTEIN S21Bpl_scaf_1705119809691985858-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01249Ribosomal_S21eRibosomal protein S21e FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001931FamilySmall ribosomal subunit protein eS21Interproscan
IPR038579Homologous_superfamilySmall ribosomal subunit protein eS21 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR1044240S RIBOSOMAL PROTEIN S21Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000447Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000461Biological Processendonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02971RP-S21e, RPS21; small subunit ribosomal protein S21e-Ribosome ko03010PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_17051-19.5 global RNA-seq network
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