Gene detail

Detailed information of Bpl_scaf_17051-11.33 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_17051-11.33	HECT DOMAIN UBIQUITIN-PROTEIN LIGASE	Bpl_scaf_17051	1043977	1081534	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_17051-11.33

ATGGTAGAGGGGATATTATCTACTCCAGCACCTTCTAGTCAAACAGCTCCTACCAGTCAGGTGCCTTCATTAGATAACTTCTCTACACCTGCTAACCCACCACCTAACACAACACCAGGTGCTCCAATATTAGACAGATGTCCTTTAGCAGAAAGGCAACCAGTTTCACAATCTAATGGTATTGTCACATCTAGGGCTTTACCAGACTTTGGTCAAGTTGACGTACCCATCAGTCTTGCAGTTCTGAGTGAATCAATATCAGCTCCATTGGTTCCGCCTGCAGCTACATCGATGCCAACTTCACTGAACACAATAATCCCTGCTACAAACTCAGCATCATCAGTGGTACCAAGTACCTCTTCAGAAGCAACACCTAGTTCTTCAGCAGGGCCTGCAAGTTCTTCAGGAGGAGAGAACAATCTACCTGATGGTGTAGACCCATCATTTCTAGCAGCTCTACCTGATAGCATCCGACAAGAAGTGATCGCTGAACAGTTGCGTCTCCAGCGAATCCAGCAGAGTGCCAGAGACCAAGCACAAACAGCTCAAAACATTGGTTCTATGGAAGTCAGTCCAGAATTTTTAGCTGCTTTGCCGCCAGGAATTCAAGAAGAGGTACTAGCACAACAGAGAGCTGAACAAGCCAGACTACAAGCTCTGTCACAACCAGCTCAGCCTCCATCTGATACACCAGTCGACCCTTATAGTTTCTTTGCTACTCTTCCTACATCCTTACGTAGGCAGGTGTTGGCCGAGATGGATGACAGTATGGTGGCAGTTCTTCCTTCAGACTTGGCTACTGAGGCCCAGTCCTTGAGAAGAGAACTGGAAATTGACCGCCTTTTCTCGCAAGCTGGTGCAGGGTCACTTTCTGCTATTTTACGGCATTCAGGCTTTTCTGGTGGTAGACTTGGTGCTGGAAGATATACAATCAGAGCTGTACCTACAGGAGGAAGACACTGGCCATTCAGTTCAGGAAGGCCAGGTCCTTCTAGCAGTACACCAAAAAATAGTGCACTTAGAGTTCGTGGACGTTATCTCTTAGATCATGAAGCAATGGCATGTTTACTTGTTTTACTGTTTGTTGATGAACCAAAGTTAAATACAACTCGTTTACATCGTGTTTTAAGGAATTTGTGTTATCATGGACCTACGAGAATATGGGTGATTAAAGCCTTATTGTCTATTCTTCATAAAACAGGAGAATGTCAACTGGAAGAGGAGAAAAGTAAGAGTGTGGACAAAAATAAAAAGAAAGGTGCTGTAGACAACCCTGTGACTATGAAAAGTGATACTAAAAATCAGGGTACTTGGTTGTCAATGAGTCTTGAGGCAGCCTTAGGTTGTCGAGCAAATGTTTTCCAAGTTCACAAAACGGGTAAAAAACACAGTAGCAATACTAGTGGAACAGTGACTATTCATCCACAAGCTGCCCCAGTGGTGTGTAGACATGCTTTAGATACATTAATAGCATTAGCAAAAATATTTCCAGGTCAATTTTTACCATCGACAAAGGCGAAAGAAGTTGGGAAATGTGATAATACTGACGAGAAAAAAAGTGTCGATAAAGGAAAATCCTCTAGTAGTGCTAGTCCAAAAGCAATGCAAAACACTGACGTTGAATTTTGGGATTTATTAGTAAAATTAGATAGTATAAGTGGTAGTAAGAAAGGAAAAGGAATGCAAAGGACTCATAGTATGCCCCCAGCAGAGGGAGATATACAGTTTCATAGTTATGAATCTTCTCCACTGGGAACCTTAATGTGTATGTTAAATCATCCGGTTATTAAACGAAGTCAGTTATTAACGGATCGACTTCTGAGACTTTTAGGGTTAGTTTCGAATGGTTTACCAGAGGCAGTCAGTGCACAGACACAAGAAAGTGTAACAGGAAATATGCCCCAGGCATCAACTGCTCAAGCCACCTCTATAGCAAGTGTGCCTAGTGCATCAAATGCACAAGCAAGTACAATAGTAAGTTTACCTAATGATTTAAGTACTCAGCAGAGTATCCCAAATGCATCAACTGCTCAAGAAGGTTCTGTAGCAAGTGTGCCAAATACAGCGAATGTGCAAGAAAACACAGTACGGATGACATCAGGAGATTTAATCAATGCTATCGTTGAGGACTACATTACGGAGGGTGGTAGACCTCCTACGTCTGTGTCTACTCCTGCAGTAACAGCATCGACTGGCACAAACACGGCTACAGAACAGACTGGAGAATGGAGCTCCGCTGAACAACAGTTTAATAGAGAATGGGATGCTCTAGCAGATCAAGTAGAACGTGAAGAAGTGATGAAATCACTTACAACAGATGATGATAACAGGAAGACACCAGTACAACAAAGTGCTATTTTAGAAGATCAGTTAGAATTGGCAGTCAAGGTGCTTACATCAAAGTCATGTTCTGAAGAGGGTTTAGAAGATGCAACAAATCTGTTAGTACAGCTTTCATGGGCAAATTCATCTACCAGAGAGGCAGTTCTTGATCTACTGTTGAATGGTGCTAGAGAACTTGGATTTACAGTTTGTGCTCATATTAGGATATTGATAGATGAGTTAAGGAAACTGGATGTAAAGTCTAGGTATGAAGATGATGAAGACTCCAGAGATATGGATACCATGCAATCAACAACCAAAGGATTCATTCCAGACAGGTATAATCCTGGTCAGAATTTAGTTGTAAGTGCCTCAAAGAAAGTGAAAGTAGGAAGAGAATTACAGTTACCCTCTATGACAGCTTTAACCAGCAAGACATCGAGTCAACAGTTCTTTCTTAGGATACTTAAAGTCATCATCCAACTGAGGGAGGCAGCTAGATCAGTTGGCAAGAAAACTCCTAGTAATAGAGGCAGGATTGGGGGCAGAGATTCAAGAATCTTAGGAAACATTGCAGAGGCTATGGATGCATTAGAAGCAGAAGCTGAAGCCATAATGGAGATGGTAGGAAGACGTGGTAATCAGCTTCAGTCCCAGTCATCCAGTGAGGCACCAGAGCTGGCAGGTGCTGAGAGTAATGTAGATGGTACCCCTGGCCAGAGTGTGACCTCAACTGACGGTTCAGCCAATGCACCAAGTACATCTGAAACTCCAATGGATGTAGACCAACCAGGTACTTCAGGACAAAATGATAAAAAAGATAAAAAGGAAATAATATTACCAAGATTGAGTGACCAGTTGATGTTAGAAGAATTATGGAATTGCTTAGGGGAATGA

Transcript

Bpl_scaf_17051-11.33

GTTCAGTACATCAGAAGCTGCTGTGTCCAGTTCTAGTACAGCTACTACACCTACAGAGAATTCAGTACCCTCTGTAACGTCTGCTGATGTTAATATACCTGCTCCACAAGAATCGAGACCTATTAGTGCCTCAGAGGCAGCAGCTGCCGCAGAGAGGATTGCAACAGCTATGGTAGAGGGGATATTATCTACTCCAGCACCTTCTAGTCAAACAGCTCCTACCAGTCAGGTGCCTTCATTAGATAACTTCTCTACACCTGCTAACCCACCACCTAACACAACACCAGGTGCTCCAATATTAGACAGATGTCCTTTAGCAGAAAGGCAACCAGTTTCACAATCTAATGGTATTGTCACATCTAGGGCTTTACCAGACTTTGGTCAAGTTGACGTACCCATCAGTCTTGCAGTTCTGAGTGAATCAATATCAGCTCCATTGGTTCCGCCTGCAGCTACATCGATGCCAACTTCACTGAACACAATAATCCCTGCTACAAACTCAGCATCATCAGTGGTACCAAGTACCTCTTCAGAAGCAACACCTAGTTCTTCAGCAGGGCCTGCAAGTTCTTCAGGAGGAGAGAACAATCTACCTGATGGTGTAGACCCATCATTTCTAGCAGCTCTACCTGATAGCATCCGACAAGAAGTGATCGCTGAACAGTTGCGTCTCCAGCGAATCCAGCAGAGTGCCAGAGACCAAGCACAAACAGCTCAAAACATTGGTTCTATGGAAGTCAGTCCAGAATTTTTAGCTGCTTTGCCGCCAGGAATTCAAGAAGAGGTACTAGCACAACAGAGAGCTGAACAAGCCAGACTACAAGCTCTGTCACAACCAGCTCAGCCTCCATCTGATACACCAGTCGACCCTTATAGTTTCTTTGCTACTCTTCCTACATCCTTACGTAGGCAGGTGTTGGCCGAGATGGATGACAGTATGGTGGCAGTTCTTCCTTCAGACTTGGCTACTGAGGCCCAGTCCTTGAGAAGAGAACTGGAAATTGACCGCCTTTTCTCGCAAGCTGGTGCAGGGTCACTTTCTGCTATTTTACGGCATTCAGGCTTTTCTGGTGGTAGACTTGGTGCTGGAAGATATACAATCAGAGCTGTACCTACAGGAGGAAGACACTGGCCATTCAGTTCAGGAAGGCCAGGTCCTTCTAGCAGTACACCAAAAAATAGTGCACTTAGAGTTCGTGGACGTTATCTCTTAGATCATGAAGCAATGGCATGTTTACTTGTTTTACTGTTTGTTGATGAACCAAAGTTAAATACAACTCGTTTACATCGTGTTTTAAGGAATTTGTGTTATCATGGACCTACGAGAATATGGGTGATTAAAGCCTTATTGTCTATTCTTCATAAAACAGGAGAATGTCAACTGGAAGAGGAGAAAAGTAAGAGTGTGGACAAAAATAAAAAGAAAGGTGCTGTAGACAACCCTGTGACTATGAAAAGTGATACTAAAAATCAGGGTACTTGGTTGTCAATGAGTCTTGAGGCAGCCTTAGGTTGTCGAGCAAATGTTTTCCAAGTTCACAAAACGGGTAAAAAACACAGTAGCAATACTAGTGGAACAGTGACTATTCATCCACAAGCTGCCCCAGTGGTGTGTAGACATGCTTTAGATACATTAATAGCATTAGCAAAAATATTTCCAGGTCAATTTTTACCATCGACAAAGGCGAAAGAAGTTGGGAAATGTGATAATACTGACGAGAAAAAAAGTGTCGATAAAGGAAAATCCTCTAGTAGTGCTAGTCCAAAAGCAATGCAAAACACTGACGTTGAATTTTGGGATTTATTAGTAAAATTAGATAGTATAAGTGGTAGTAAGAAAGGAAAAGGAATGCAAAGGACTCATAGTATGCCCCCAGCAGAGGGAGATATACAGTTTCATAGTTATGAATCTTCTCCACTGGGAACCTTAATGTGTATGTTAAATCATCCGGTTATTAAACGAAGTCAGTTATTAACGGATCGACTTCTGAGACTTTTAGGGTTAGTTTCGAATGGTTTACCAGAGGCAGTCAGTGCACAGACACAAGAAAGTGTAACAGGAAATATGCCCCAGGCATCAACTGCTCAAGCCACCTCTATAGCAAGTGTGCCTAGTGCATCAAATGCACAAGCAAGTACAATAGTAAGTTTACCTAATGATTTAAGTACTCAGCAGAGTATCCCAAATGCATCAACTGCTCAAGAAGGTTCTGTAGCAAGTGTGCCAAATACAGCGAATGTGCAAGAAAACACAGTACGGATGACATCAGGAGATTTAATCAATGCTATCGTTGAGGACTACATTACGGAGGGTGGTAGACCTCCTACGTCTGTGTCTACTCCTGCAGTAACAGCATCGACTGGCACAAACACGGCTACAGAACAGACTGGAGAATGGAGCTCCGCTGAACAACAGTTTAATAGAGAATGGGATGCTCTAGCAGATCAAGTAGAACGTGAAGAAGTGATGAAATCACTTACAACAGATGATGATAACAGGAAGACACCAGTACAACAAAGTGCTATTTTAGAAGATCAGTTAGAATTGGCAGTCAAGGTGCTTACATCAAAGTCATGTTCTGAAGAGGGTTTAGAAGATGCAACAAATCTGTTAGTACAGCTTTCATGGGCAAATTCATCTACCAGAGAGGCAGTTCTTGATCTACTGTTGAATGGTGCTAGAGAACTTGGATTTACAGTTTGTGCTCATATTAGGATATTGATAGATGAGTTAAGGAAACTGGATGTAAAGTCTAGGTATGAAGATGATGAAGACTCCAGAGATATGGATACCATGCAATCAACAACCAAAGGATTCATTCCAGACAGGTATAATCCTGGTCAGAATTTAGTTGTAAGTGCCTCAAAGAAAGTGAAAGTAGGAAGAGAATTACAGTTACCCTCTATGACAGCTTTAACCAGCAAGACATCGAGTCAACAGTTCTTTCTTAGGATACTTAAAGTCATCATCCAACTGAGGGAGGCAGCTAGATCAGTTGGCAAGAAAACTCCTAGTAATAGAGGCAGGATTGGGGGCAGAGATTCAAGAATCTTAGGAAACATTGCAGAGGCTATGGATGCATTAGAAGCAGAAGCTGAAGCCATAATGGAGATGGTAGGAAGACGTGGTAATCAGCTTCAGTCCCAGTCATCCAGTGAGGCACCAGAGCTGGCAGGTGCTGAGAGTAATGTAGATGGTACCCCTGGCCAGAGTGTGACCTCAACTGACGGTTCAGCCAATGCACCAAGTACATCTGAAACTCCAATGGATGTAGACCAACCAGGTACTTCAGGACAAAATGATAAAAAAGATAAAAAGGAAATAATATTACCAAGATTGAGTGACCAGTTGATGTTAGAAGAATTATGGAATTGCTTAGGGGAATGAGAAAAGGCTAGTAAGTCCAAGGATCAGCCGTCACAGAAGAGAGAAGATCAGTTAGCTCATCTTAACATTGATTTTGCTCCAGCCTCACCAGCTGCTTCATCAGAGACGTCCTCATTGATGAGAGAAAATTCTGTCACCTCAATATCATCATTACCTCCAGATGCTCAAAAATTCCTTAAATTTGCAGAAACACATCGAACTGTTCTTAATCAAATTTTACGCCAATCTACAACACCACTGTGTGATGGGCCATTTTCTGTGTTAGTGGATCACACTAGAATACTGGATTTTGATGTTAAAAGACGGTATTTTAGACAAGAACTTGAAAGACTTGATGAAGGCATGAGACGAGAAGATTTAGCTGTACATATCAGGAGAGAAAATGTATTTGAAGATTCCTTTAGAGAACTGTTCAGGAGAAAAGCTGATGAATGGAAACATAGATTTTATATTGTATTTGAAGGGGAGGAAGGTCAAGATGCTGGAGGACTTTTACGTGAATGGTACATCATAATATCCAGAGAAATCTTTAATCCTAACTATGCATTGTTTGCTACATCTCCTGGAGATCGTGTTACGTATACAATTAATCCAAGTTCACACTGTAACTCTAATCATCTTAGCTATTTTAAATTTGTTGGACGTATCATCGCTAAAGCGATCTATGACAATAAATTGCTGGACTGTTACTTTACAAGGTCTTTCTACAAACATATTCTGGGACAACATGTCAAATACACCGACATGGAAAGTGAAGATTATTCCTTTTATAGAAGTTTAGTCTTCTTACTAGAAAATCACATACAAGATCTAGGGTATGAACTCACATTCAGCACTGAGATAAGAGAATTTGGTGTAACAGAAACCAGAGATCTCAAACCTAATGGTCAGAATATACCTGTGACAGAGGAAAACAAAAAGGAGTATGTCAAACTAGTGTGTCAAATGAAAATGACTGGTGCTATTCGTAAACAGCTTGGAGCATTCATGGAAGGATTTTACGACATTATACCAAAACGATTGATATCAATATTTACTGAACAAGAACTAGAGTTACTGATTTCTGTTTATGGGAAAGGGGTGCAATGGTTTTGGAGAGCATTGAGGTCCTTTGATCAAGCTGACCGAGCACAGTTCTTACAGTTTGTTACTGGTACATCAAAAGTTCCACTACAAGGATTTGGTTATCTGGAAGGAATGAATGGATATCAAAAGTTTCAGATCCACAGAGATGACAGGTCCACCGATAGATTGCCTGTAGCTCATACTTGGTAA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|UBM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14377	UBM	Ubiquitin binding region	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025527	Conserved_site	HUWE1/REV1, ubiquitin-binding motif	Interproscan
IPR050409	Family	E3 ubiquitin-protein ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11254	HECT DOMAIN UBIQUITIN-PROTEIN LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10592	HUWE1, MULE, ARF-BP1; E3 ubiquitin-protein ligase HUWE1	EC:2.3.2.26	Ubiquitin mediated proteolysis	ko04120	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_17051-11.33 global RNA-seq network