Detailed information of Bpl_scaf_17050-0.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_17050-0.3TRANSCRIPTION INTERMEDIARY FACTORBpl_scaf_170501662248567-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001487DomainBromodomainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45915TRANSCRIPTION INTERMEDIARY FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08883TRIM33, TIF1G; tripartite motif-containing protein 33EC:2.3.2.27
Protein kinasesko01001PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_17050-0.3 global RNA-seq network
TOP